Transcript Information: R_Transcript_384109.p1


Annotated TAIR IDAT1G05460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SDE3
Annotation TypeHomolog
Chromosome Positionchr1:1601357-1604658 | Reverse length=1002
E-Value9E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14149582135441
Replicate 20.16276201873099
Replicate 30.1775716092725
Condition 2: 8 Hour
Replicate 10.37962581313558
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.17097099915176
Replicate 30.16967212935579


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_384109.p1 GENE.R_Transcript_384109~~R_Transcript_384109.p1 ORF type:5prime_partial len:129 (+),score=19.38 R_Transcript_384109:2-388(+)
GATGTTTGGAATGACAGGATTGAACGGGTAGTCTTCCTTTTGGCAGAAGATAGCATCTCAAAATCTTTAGTTTCAAACAAGCAACCTTATCAAAGGGGAAGGAGAAAGAACCAGTTTTCCGTAGATTCTTATGTTGCTGGCGTTCGACCAGCTAGGGCAACAAACCGCAGTTTCCGATACAAGCTTCCTATGTTTGAGATCCCGAAGGACATCAAAGAAGTAATAGAGAATAATCAGCTTCCAGATGTTCTACTTGATGGTCTATCAAGAAAGAACTATGTAGATTACTTCAAAATGTTGCTAATTATGGAAGAACTGCGCTTGGAGGTTATTATGGACTCATTTTTGTTTTTTTTGGGCAGTTTTTGTGGCACTGTTAGTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_384109.p1 GENE.R_Transcript_384109~~R_Transcript_384109.p1 ORF type:5prime_partial len:129 (+),score=19.38 R_Transcript_384109:2-388(+)
DVWNDRIERVVFLLAEDSISKSLVSNKQPYQRGRRKNQFSVDSYVAGVRPARATNRSFRYKLPMFEIPKDIKEVIENNQLPDVLLDGLSRKNYVDYFKMLLIMEELRLEVIMDSFLFFLGSFCGTVSD*

Click here to download the sequence:
Link to NCBI Protein BLAST