Transcript Information: R_Transcript_384111.p1


Annotated TAIR IDAT1G05460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SDE3
Annotation TypeOrtholog
Chromosome Positionchr1:1601357-1604658 | Reverse length=1002
E-Value1.5E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1941189409629
Replicate 20.39245421338875
Replicate 30
Condition 2: 8 Hour
Replicate 10.4576797186401
Replicate 20.20898020412323
Replicate 30.50892366225384
Condition 3: 24 Hour
Replicate 10
Replicate 20.82449565946083
Replicate 30.40911597545603


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_384111.p1 GENE.R_Transcript_384111~~R_Transcript_384111.p1 ORF type:3prime_partial len:107 (+),score=21.51,AAA_12|PF13087.2|9.3e-09 R_Transcript_384111:16-333(+)
ATGAGGCAGGCCAAGCTTCCGAACCAGAGACTATGGTTCCCATTTCCAACCTCTGTCAGAAGAACACTGGTTGTTCTTGCTGGAGATCCCTTGCAACTAGGGCCTGTCATCTTCTCCACAGTTGCTAAGAAACATGGATTGGGAACATCATTCATGGAAAGGCTGTTTGAACATGATCTCTATGGTGAAGGGGATGAAGGTTACGTAACAACATTACGGAGGAACTACCGGTGCCATCCTGAAATTCTCCAGCTGCCTTCAAAATTGTTTTATGAAGAGGAATTGATAGCATGCCGCGAGGCCATGAAATCTACTCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_384111.p1 GENE.R_Transcript_384111~~R_Transcript_384111.p1 ORF type:3prime_partial len:107 (+),score=21.51,AAA_12|PF13087.2|9.3e-09 R_Transcript_384111:16-333(+)
MRQAKLPNQRLWFPFPTSVRRTLVVLAGDPLQLGPVIFSTVAKKHGLGTSFMERLFEHDLYGEGDEGYVTTLRRNYRCHPEILQLPSKLFYEEELIACREAMKSTP

Click here to download the sequence:
Link to NCBI Protein BLAST