Transcript Information: R_Transcript_384112.p1


Annotated TAIR IDAT1G05460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SDE3
Annotation TypeOrtholog
Chromosome Positionchr1:1601357-1604658 | Reverse length=1002
E-Value3.9E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5232034260935
Replicate 20.49403059803054
Replicate 31.819064456165
Condition 2: 8 Hour
Replicate 11.0082414978277
Replicate 21.1180440920593
Replicate 31.9753223322186
Condition 3: 24 Hour
Replicate 12.3633036852048
Replicate 21.8163154380475
Replicate 32.4462728767709


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_384112.p1 GENE.R_Transcript_384112~~R_Transcript_384112.p1 ORF type:internal len:340 (-),score=56.38,AAA_11|PF13086.2|6.9e-17,AAA_11|PF13086.2|2.1e-14,AAA_30|PF13604.2|4.2e-11,AAA_19|PF13245.2|2e-09 R_Transcript_384112:1-1017(-)
CTAGAACTGAAGAAGGAAGACATGAGGGCTTATGATATGGAGGAAGTGAGAATGAGAAGCCGGGGTCGTCAGTATCTGACCCTTGAAGTTCTGGGATTGGCTGAGAGAAGACCGTCTCTTGTCCATGGAGATTCTGTCTTTGCCAGACTTGCTATCCAAAATGCTGGGGAGACTCCAGTGTATGAGGGTTGTATTCATCGTGTTGAGGCTGATCAAGTATATCTTAGATTTGATGATGACTTTCACTTGCGTCACAGAGATGAAAATTCTTATGACATACGGTTTATGTACAATCGTGTCAATATGAGAAGGTTGTATCAGGCCGTTGAAGCTGCCGAAGGATTACAGACAGACTTCCTCTTTCCTTCTGAGACTGTGGTGAAGAGACAGATTACACCATATCAGATGGTGCCAATTTCATGTAATCTTAATGGGGAGCAACTGAATGCTGTTGAAATGATACTAGGATGCAAAGGAGGAGTCCCATATATAATTAATGGCCCCCCCGGTACTGGTAAAACCATGACACTTGTAGAAGCGATCCTCCAAGTTTATCGGGTCAGAAAAGACACTCGACTTCTGATTTGTGCATCCTCAAATTGCGCAGCAGATCATATACTGGAGAAAATACTGAATGAAAAAGGCCTACAGGTTCGGGAGAATGAGATTTTCAGGCTGAATGCAAGTAGTCGTCCTTATGAGGATATGAAGCCTGATTATATTAGGTTCTGTTTCTTTGAGCAATCTATTTTTAGGTGTCCTCCACTTAAGGCCCTCTTGCGCTACAGAATAGTTATAACAACATATATGAGTTCTTCCCTTCTTTATGCAGAAGGCATCAGGCGGGGACACTTCTCTCACATAATCCTGGATGAGGCAGGCCAAGCTTCCGAACCAGAGACTATGGTTCCCATTTCTAACCTCTGTCAGAAGAACACTGTGGTTGTTCTTGCTGGAGATCCCTTGCAACTAGGGCCTGTCATCTTCTCTACAAATGCTAAGAAATATGGATTTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_384112.p1 GENE.R_Transcript_384112~~R_Transcript_384112.p1 ORF type:internal len:340 (-),score=56.38,AAA_11|PF13086.2|6.9e-17,AAA_11|PF13086.2|2.1e-14,AAA_30|PF13604.2|4.2e-11,AAA_19|PF13245.2|2e-09 R_Transcript_384112:1-1017(-)
LELKKEDMRAYDMEEVRMRSRGRQYLTLEVLGLAERRPSLVHGDSVFARLAIQNAGETPVYEGCIHRVEADQVYLRFDDDFHLRHRDENSYDIRFMYNRVNMRRLYQAVEAAEGLQTDFLFPSETVVKRQITPYQMVPISCNLNGEQLNAVEMILGCKGGVPYIINGPPGTGKTMTLVEAILQVYRVRKDTRLLICASSNCAADHILEKILNEKGLQVRENEIFRLNASSRPYEDMKPDYIRFCFFEQSIFRCPPLKALLRYRIVITTYMSSSLLYAEGIRRGHFSHIILDEAGQASEPETMVPISNLCQKNTVVVLAGDPLQLGPVIFSTNAKKYGFG

Click here to download the sequence:
Link to NCBI Protein BLAST