Transcript Information: R_Transcript_38443.p1


Annotated TAIR IDAT5G17290.1
Annotated Gene Nameautophagy protein Apg5 family
Annotated Gene Symbol(s)ATG5, APG5, ATATG5
Annotation TypeOrtholog
Chromosome Positionchr5:5687160-5689821 | Reverse length=337
E-Value6.9E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.460695514215
Replicate 26.1337506834129
Replicate 34.5041337969963
Condition 2: 8 Hour
Replicate 112.655615590711
Replicate 214.572260076278
Replicate 312.593954559651
Condition 3: 24 Hour
Replicate 16.1263811422244
Replicate 24.9562379529387
Replicate 35.2259969055794


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38443.p1 GENE.R_Transcript_38443~~R_Transcript_38443.p1 ORF type:complete len:356 (+),score=61.31,APG5|PF04106.8|9e+03,APG5|PF04106.8|8.7e-60 R_Transcript_38443:613-1680(+)
ATGGAGAAAGGAGAAACAGAGGCGCAGAAATACGTTTGGGGAGGAGCTATTCCCCTTCAAATTCATCTCCATCAATCTGAAGTCACCACCTTACCTCCCCCTCCTCCTTTTCTGATCTTAGCTCCACGGATAGGTTACCTTCCATTGCTAGCACCTCAAGTAAAACCTCTCTTCAGCAGCACCCTCCCTCCAGGGGCTGAGACTGTGTGGTTTGAGTACAAGGGACTACCATTGAAGTGGTATATACCCACTGGCGTTCTCTTTGATCTTTTATGTGCGGAGCCTGAAAGACCCTGGAATCTTACAGTACACTTCAGAGGATATCCAGGCAACATACTAACCCCATGTGAAAGTGAAGATGCTGTTAAGTGGAGCTTCATTAATTCTTTGAAGGAGGCTGCCTACATTATTAACGGAAATTGCAAGAATATTATGAACATGTCCCAATCTGATCAGTCGGAGTTGTGGCGCTCTGTTTTAGATGGCAATTTGGAATTGTTTCTCAAGGTAACATCAAAGCTGAAGCTTGGAGCGATTGAGGATAAATACACTGCAAAATTATATTCGTCATTAAAATCCCGGCCTACTACTGGTAATGCGGATACTCTTGGACTTGTTAAAACAGGCAGAATTCCAGTTAGGTTGTATGTGAGGATTTTTGCTGAGGCGTTTGATGATTTAGAAGATGCTCCAGAACTTGACAGCTGGGAAACAATCTCTTACATAAACAGACCCATTGAGACTGATAAACATGAAGGCAAATGCTTTACCTTAAGTGATGCTATGAAGACTCTCTTACCAGAGTACTACGGAGAAAGATCACGCAACAAGGAGGAAACAGTAGAGGTTGACGATACAAAAGCTGCAGAAGAGGGAGCTACAGCCATCACCGAACAAATCGAGTTCCAGCAACCATCAGAAAACGTTGAAATCAAGCTCATCAGAATTCAAGGGATTGAGCCAAGATCAGAGATCCCGTTCTCTTGGGTTGTCAACAATTTGATGAACCCCGATCACTACCTTCACATATGTGTTTACTTGATTCGTTTGCAATCTGCTTCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38443.p1 GENE.R_Transcript_38443~~R_Transcript_38443.p1 ORF type:complete len:356 (+),score=61.31,APG5|PF04106.8|9e+03,APG5|PF04106.8|8.7e-60 R_Transcript_38443:613-1680(+)
MEKGETEAQKYVWGGAIPLQIHLHQSEVTTLPPPPPFLILAPRIGYLPLLAPQVKPLFSSTLPPGAETVWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILTPCESEDAVKWSFINSLKEAAYIINGNCKNIMNMSQSDQSELWRSVLDGNLELFLKVTSKLKLGAIEDKYTAKLYSSLKSRPTTGNADTLGLVKTGRIPVRLYVRIFAEAFDDLEDAPELDSWETISYINRPIETDKHEGKCFTLSDAMKTLLPEYYGERSRNKEETVEVDDTKAAEEGATAITEQIEFQQPSENVEIKLIRIQGIEPRSEIPFSWVVNNLMNPDHYLHICVYLIRLQSASL*

Click here to download the sequence:
Link to NCBI Protein BLAST