Transcript Information: R_Transcript_38444.p1


Annotated TAIR IDAT5G17290.1
Annotated Gene Nameautophagy protein Apg5 family
Annotated Gene Symbol(s)ATG5, APG5, ATATG5
Annotation TypeOrtholog
Chromosome Positionchr5:5687160-5689821 | Reverse length=337
E-Value1.4E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7433681428381
Replicate 25.9397428809264
Replicate 34.3703644097922
Condition 2: 8 Hour
Replicate 111.679113214969
Replicate 29.2679970789124
Replicate 314.987020610912
Condition 3: 24 Hour
Replicate 13.7759551361355
Replicate 23.1922085236362
Replicate 35.615924228875


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38444.p1 GENE.R_Transcript_38444~~R_Transcript_38444.p1 ORF type:internal len:304 (+),score=48.63,APG5|PF04106.8|1.3e-48 R_Transcript_38444:2-910(+)
GGCAAGATTATGAGGCTCATCTTGTTGGTGGCGATAAGTTTACCATTCAAATTTGAGATCTTAGCTCCACGGATAGGTTACCTTCCATTGCTAGCACCTCAAGTAAAACCTCTCTTCAGCAGCACCCTCCCTCCAGGGGCTGAGACTGTGTGGTTTGAGTACAAGGGACTACCATTGAAGTGGTATATACCCACTGGCGTTCTCTTTGATCTTTTATGTGCGGAGCCTGAAAGACCCTGGAATCTTACAGTACACTTCAGAGGATATCCAGGCAACATACTAACCCCATGTGAAAGTGAAGATGCTGTTAAGTGGAGCTTCATTAATTCTTTGAAGGAGGCTGCCTACATTATTAACGGAAATTGCAAGAATATTATGAACATGTCCCAATCTGATCAGTCGGAGTTGTGGCGCTCTGTTTTAGATGGCAATTTGGAATTGTTTCTCAAGGTAACATCAAAGCTGAAGCTTGGAGCGATTGAGGATAAATACACTGCAAAATTATATTCGTCATTAAAATCCCGGCCTACTACTGGTAATGCGGATACTCCTGGACTTGTCAAAAGAGGTAGAATTCCAGTTAGGTTGTATGTGAGGATTTTTGCTGAGGCGTTTGATGATTTAGAAGATGCTCCAGAACTTGACAGCTGGGAAACAATCTCTTACATAAACAGACCCATTGAGACTGATAAACATGAAGGCAAATGCTTTACCTTAAGTGATGCTATGAAGACTCTCTTACCAGAGTACTACGGAGAAAGATCACGCAACAAGGAGGAAACAGTAGAGGTTGACGATACAAAAGCTGCAGAAGAGGGAGCTACAGCCATCACCGAACAAATCGAGTTCCAGCAACCATCAGAAAACGTTGAAATCAAGCTCATCAGAATTCAAGGGATTGAGCCAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38444.p1 GENE.R_Transcript_38444~~R_Transcript_38444.p1 ORF type:internal len:304 (+),score=48.63,APG5|PF04106.8|1.3e-48 R_Transcript_38444:2-910(+)
GKIMRLILLVAISLPFKFEILAPRIGYLPLLAPQVKPLFSSTLPPGAETVWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILTPCESEDAVKWSFINSLKEAAYIINGNCKNIMNMSQSDQSELWRSVLDGNLELFLKVTSKLKLGAIEDKYTAKLYSSLKSRPTTGNADTPGLVKRGRIPVRLYVRIFAEAFDDLEDAPELDSWETISYINRPIETDKHEGKCFTLSDAMKTLLPEYYGERSRNKEETVEVDDTKAAEEGATAITEQIEFQQPSENVEIKLIRIQGIEPR

Click here to download the sequence:
Link to NCBI Protein BLAST