Transcript Information: R_Transcript_38445.p1


Annotated TAIR IDAT5G17290.1
Annotated Gene Nameautophagy protein Apg5 family
Annotated Gene Symbol(s)ATG5, APG5, ATATG5
Annotation TypeOrtholog
Chromosome Positionchr5:5687160-5689821 | Reverse length=337
E-Value4.8E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9479012666349
Replicate 26.6375401316039
Replicate 37.6109482980765
Condition 2: 8 Hour
Replicate 18.688532723216
Replicate 213.20013347399
Replicate 310.949519954879
Condition 3: 24 Hour
Replicate 16.8132847256412
Replicate 24.4821977745367
Replicate 36.2838894101092


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38445.p1 GENE.R_Transcript_38445~~R_Transcript_38445.p1 ORF type:complete len:310 (+),score=57.31,APG5|PF04106.8|7e+03,APG5|PF04106.8|1.6e-32,APG5|PF04106.8|1.9e-18 R_Transcript_38445:613-1542(+)
ATGGAGAAAGGAGAAACAGAGGCGCAGAAATACGTTTGGGGAGGAGCTATTCCCCTTCAAATTCATCTCCATCAATCTGAAGTCACCACCTTACCTCCCCCTCCTCCTTTTCTGATCTTAGCTCCACGGATAGGTTACCTTCCATTGCTAGCACCTCAAGTAAAACCTCTCTTCAGCAGCACCCTCCCTCCAGGGGCTGAGACTGTGTGGTTTGAGTACAAGGGACTACCATTGAAGTGGTATATACCCACTGGCGTTCTCTTTGATCTTTTATGTGCGGAGCCTGAAAGACCCTGGAATCTTACAGTACACTTCAGAGGATATCCAGGCAACATACTAACCCCATGTGAAAGTGAAGATGCTGTTAAGTGGAGCTTCATTAATTCTTTGAAGGAGGCTGCCTACATTATTAACGGAAATTGCAAGAATATTATGAACATGTCCCAATCTGATCAGTCGGAGTTGTGGCGCTCTGTTTTAGATGCAGGTAGAATTCCAGTTAGGTTGTATGTGAGGATTTTTGCTGAGGCGTTTGATGATTTAGAAGATGCTCCAGAACTTGACAGCTGGGAAACAATCTCTTACATAAACAGACCCATTGAGACTGATAAACATGAAGGCAAATGCTTTACCTTAAGTGATGCTATGAAGACTCTCTTACCAGAGTACTACGGAGAAAGATCACGCAACAAGGAGGAAACAGTAGAGGTTGACGATACAAAAGCTGCAGAAGAGGGAGCTACAGCCATCACCGAACAAATCGAGTTCCAGCAACCATCAGAAAACGTTGAAATCAAGCTCATCAGAATTCAAGGGATTGAGCCAAGACCAGAGATCCCATTGTCTTGGGTTGTCAACAATTTGATGAACCCCGATCACTACCTTCACATATGTGTTTACTTGATTCGTTTGCAATCTGCTTCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38445.p1 GENE.R_Transcript_38445~~R_Transcript_38445.p1 ORF type:complete len:310 (+),score=57.31,APG5|PF04106.8|7e+03,APG5|PF04106.8|1.6e-32,APG5|PF04106.8|1.9e-18 R_Transcript_38445:613-1542(+)
MEKGETEAQKYVWGGAIPLQIHLHQSEVTTLPPPPPFLILAPRIGYLPLLAPQVKPLFSSTLPPGAETVWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILTPCESEDAVKWSFINSLKEAAYIINGNCKNIMNMSQSDQSELWRSVLDAGRIPVRLYVRIFAEAFDDLEDAPELDSWETISYINRPIETDKHEGKCFTLSDAMKTLLPEYYGERSRNKEETVEVDDTKAAEEGATAITEQIEFQQPSENVEIKLIRIQGIEPRPEIPLSWVVNNLMNPDHYLHICVYLIRLQSASL*

Click here to download the sequence:
Link to NCBI Protein BLAST