Transcript Information: R_Transcript_38452.p1


Annotated TAIR IDAT3G20820.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7280930-7282027 | Forward length=365
E-Value6.3E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.802563456688
Replicate 217.774950215441
Replicate 315.50127174315
Condition 2: 8 Hour
Replicate 126.699655476722
Replicate 243.619035262806
Replicate 337.098908281668
Condition 3: 24 Hour
Replicate 125.851119919415
Replicate 231.542041481867
Replicate 324.106458312692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38452.p1 GENE.R_Transcript_38452~~R_Transcript_38452.p1 ORF type:complete len:365 (+),score=8.99,LRR_8|PF13855.2|5.7,LRR_8|PF13855.2|4.1e-09,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|0.00015,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|6.9e+02,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|0.076,LRR_1|PF00560.29|5.5e+02,LRR_1|PF00560.29|13,LRR_1|PF00560.29|83,LRR_1|PF00560.29|5.4,LRR_1|PF00560.29|13,LRRNT_2|PF08263.8|8.4e-10 R_Transcript_38452:255-1349(+)
ATGGGAGTTAAGTGTTTAGTTTTGGCTATCTTACTGACCGTTACAACGGTCGTTAATGGCTGCCCGCCATCAGACCGGGCTGCCCTTTTATCCATCAAGGCTGCTCTTCATGAACCGTATTTGGGTATTTTCAAGTCCTGGACCGGAGCCAATTGCTGTCTTGAGTGGTATGGGGTACATTGCGATCTGAGAACCAACCGGGTCACTGAAATTAACCTAAGAGGCGAGTCAGAAGACCCGATTTTTCAAAAGGCCGGTCGAACCGGGTACATGACCGGTTCAATCTCCCCAGCGGTTTGCAAACTGGACCGGCTCAGCAGCCTTGTCATCGCCGACTGGAAGGGCATCTCGGGCGAGATCCCGACTTGCATTTCTCTGCTCCCGAGCCTCCGGCTCATGGAACTTGTCGGGAACCGGATCTCAGGGAAAATCCCGGCTTATATCGGCCGGTTGAGGGACCTCATGGTTCTTAACTTGGCTGATAATAGCCTCACCGGTCCTATTCCCCGGTCTATTGTCTCGTTAAACCGGTTGAAACACTTGGACCTAAGAAATAACAAGCTCTCGGGCGAGCTCCCTAGAGACATGGGCCGGCTTAAAATGATAAGTCGGGCTTTGCTTAGTGGAAACCAACTAAGTGGACCGCTCCCGGTCTCAATTTCCAACATTTATCGACTCTCGGATTTGGGTCTTTCCCTGAACCGGTTATCCGGCCCAATACCTGATATGTTTGAGAAAATGCCTGTTTTGGCAACCTTGAACTTGGATGGTAACCGGATCTCGGGTCAAATACCAAAGAGCTTGTTGAATTCGGGTGTGAGTATATTGAACTTGAGCCGAAACGCCCTCGAAGGCCGGATCCCGGATGTTTTTGGACCGAGATCATATTTCACGGTTCTAGACTTATCTCACAATCGGTTTAGTGGGCCGTTACCCAAGTCCATTAGCACGGCCTCCTATATTGGGCATATGGACTTGAGCCACAACCAGCTTTGTGGGCCCATACCAAATGGGGAGCCTTATGAGCACCTTGAAGCTTCATCTTTTGTTCACAATTCTTGTCTTTGTGGCAAGCCATTAAGTAATAAATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38452.p1 GENE.R_Transcript_38452~~R_Transcript_38452.p1 ORF type:complete len:365 (+),score=8.99,LRR_8|PF13855.2|5.7,LRR_8|PF13855.2|4.1e-09,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|0.00015,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|6.9e+02,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|0.076,LRR_1|PF00560.29|5.5e+02,LRR_1|PF00560.29|13,LRR_1|PF00560.29|83,LRR_1|PF00560.29|5.4,LRR_1|PF00560.29|13,LRRNT_2|PF08263.8|8.4e-10 R_Transcript_38452:255-1349(+)
MGVKCLVLAILLTVTTVVNGCPPSDRAALLSIKAALHEPYLGIFKSWTGANCCLEWYGVHCDLRTNRVTEINLRGESEDPIFQKAGRTGYMTGSISPAVCKLDRLSSLVIADWKGISGEIPTCISLLPSLRLMELVGNRISGKIPAYIGRLRDLMVLNLADNSLTGPIPRSIVSLNRLKHLDLRNNKLSGELPRDMGRLKMISRALLSGNQLSGPLPVSISNIYRLSDLGLSLNRLSGPIPDMFEKMPVLATLNLDGNRISGQIPKSLLNSGVSILNLSRNALEGRIPDVFGPRSYFTVLDLSHNRFSGPLPKSISTASYIGHMDLSHNQLCGPIPNGEPYEHLEASSFVHNSCLCGKPLSNKC*

Click here to download the sequence:
Link to NCBI Protein BLAST