Transcript Information: R_Transcript_38469.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34163295904554
Replicate 20.056139840685289
Replicate 30.18374388446112
Condition 2: 8 Hour
Replicate 10.19641068139501
Replicate 20.23915381648327
Replicate 30.48533718236329
Condition 3: 24 Hour
Replicate 10.12276902260804
Replicate 20.11794256091218
Replicate 30.17556982369169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38469.p1 GENE.R_Transcript_38469~~R_Transcript_38469.p1 ORF type:3prime_partial len:374 (+),score=64.50,Retrotrans_gag|PF03732.13|2.7e-12 R_Transcript_38469:1185-2303(+)
ATGCAGAAGACTCTTGAGAAGCTCTCAAGGGATAGCGAGGAGAAAGACGTCGTTATCAAGCGTCAAAACGAACAAATCGCCGCTTTATCTAAGAAGTTGGAGAAAAGGCCTCAAGGTGAAGAAGAAGGAAGTGACAGCGACCAAAGTGAATCTTCCAGGCGTGGTTCATTCTCCGTGCGTCAAATCCAAGAGCTGATTAGCAGCGTTGTCAAGGCTCAGATCAACGGAGGCTCAAGAGATAATCACTTCTATACGAAACCGTATACTAAGAGAATTGATAGGTTGAGGATGCCTGCAGGATACCAACCCCCCAAGTTCCAGCAATTTGATGGCAAAGGGAATCCTAAACAACATATTGCTCATTTCATTGAGACATGCAATACCGCTGGCACAGAAGATGATTTGCTGGTGAAACAGTTCGTTCGCTCACTAAAAGGCACTGCTTTTGACTGGTACACTGACTTGAGGCCGGAGTCCATCGATGCCTGGGAACAGATGGAAAGCGAGTTCCTCAACCGCTTCTACAGCACTCGTCGTACAGTGAGTATGACTGAACTCACCAATACCAAGCAATGGAAGGACGAGCGCGTTGTTGATTACATCAACCGCTGGCGTGCGCTGTGCCTGGAGTGCAAAGACCGTCTATCGGAAGTCTCAGCAGTGGAGATGTGCATTCAAGGGATGAAGTGGGACTTACTTTACATCCTCCAAGGGATTAAGCCCAAGTCATTCCCGGAGCTAGCAACGAGGGCGCATGACATGGAACTCACAATTGCTAGTCATGGTGGTGGATCGTCTTCCTCATACGATTCAAGGAAGGAGAAGAAAGACTACAAGAAGCCTGAAAGGTCAAAGGTTTCAGGCAAAGAATCCATGGTGGTAATTACATCTCAACCGGTCAAGATTTCTGCTAAGACAAAACAAGAAGAGAAGAAAGGAGTCCCTGCAAAGGAATCATGGAAAGCTCGACCAACTCTGAAAGAGTTGCAGGAGAAGAAGTATCCGTTTCCTGACTCTGACCTTTCCGGGATGCTGGATGATCTGCTCGACAAGGGAGTCATCGAACTACCCCAACCAAAGCGTCCAGAGGAAGCTGGTCGAACAACTGACCCCAAATAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38469.p1 GENE.R_Transcript_38469~~R_Transcript_38469.p1 ORF type:3prime_partial len:374 (+),score=64.50,Retrotrans_gag|PF03732.13|2.7e-12 R_Transcript_38469:1185-2303(+)
MQKTLEKLSRDSEEKDVVIKRQNEQIAALSKKLEKRPQGEEEGSDSDQSESSRRGSFSVRQIQELISSVVKAQINGGSRDNHFYTKPYTKRIDRLRMPAGYQPPKFQQFDGKGNPKQHIAHFIETCNTAGTEDDLLVKQFVRSLKGTAFDWYTDLRPESIDAWEQMESEFLNRFYSTRRTVSMTELTNTKQWKDERVVDYINRWRALCLECKDRLSEVSAVEMCIQGMKWDLLYILQGIKPKSFPELATRAHDMELTIASHGGGSSSSYDSRKEKKDYKKPERSKVSGKESMVVITSQPVKISAKTKQEEKKGVPAKESWKARPTLKELQEKKYPFPDSDLSGMLDDLLDKGVIELPQPKRPEEAGRTTDPKY

Click here to download the sequence:
Link to NCBI Protein BLAST