Transcript Information: R_Transcript_384882.p1


Annotated TAIR IDAT1G07740.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2399117-2400496 | Reverse length=459
E-Value1.4E-185
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2008526943894
Replicate 20.69066777685191
Replicate 30.95444739983968
Condition 2: 8 Hour
Replicate 10.53697072252731
Replicate 20.63748128056011
Replicate 31.3534095638008
Condition 3: 24 Hour
Replicate 11.3593438490088
Replicate 21.0640695078787
Replicate 31.1039851048216


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_384882.p1 GENE.R_Transcript_384882~~R_Transcript_384882.p1 ORF type:complete len:456 (-),score=74.50,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|0.72,PPR_2|PF13041.2|5.3e-10,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|1.8e-15,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|1.6e-19,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|0.065,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|3.5e-06,PPR_1|PF12854.3|3.1e-10,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|6.1,PPR_1|PF12854.3|4.3e-13,PPR_1|PF12854.3|5.8e-08,PPR_1|PF12854.3|0.0065,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|0.16,PPR|PF01535.16|0.00029,PPR|PF01535.16|7e-05,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|0.00032,PPR|PF01535.16|0.52,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00059,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|0.00056,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.081,TPR_12|PF13424.2|0.91,TPR_12|PF13424.2|1.6,TPR_12|PF13424.2|1.6,TPR_12|PF13424.2|4.2e+02,TPR_12|PF13424.2|2.1e+03,TPR_14|PF13428.2|5e+02,TPR_14|PF13428.2|1.1e+04,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|6.1,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|6e+03,TPR_14|PF13428.2|1.6e+03 R_Transcript_384882:156-1523(-)
ATGAAAGACATGTTCAAGTTACAAAAACTAAAGCCAGCTCAATTGATCATCCAACAATTACGACATCAATCTACTCGAACATCAACCTCCAAAACCCGAACCAAAAAACGACGTTCAAATCCCAGAAAACCCATCCCATTTCTCGCTGATCTAAAACAACTCCATGACCCTGAAGAAGCTCTTTCTCTTTTCAATCACTACGCCCAAATGGGCTTCAAACACCATTACCCTTCTTTCTCTTCTCTCCTTTACAAGCTTGCTCGTTCAAAATCCTTTCACCACATTGACCCACTTCTTATTTTCATCAAAGATCGCAACTTTCGATGCCGAGAATCACTTTTCATAGCCTTAATGAACCATTATGGGAAATCCCATTTGGTTGATAAAGCCATTGATTTGTTCCATCAAATACCCACCTTCAATTGTGAACGTACATTGCAGTCTTTTAATACCCTTCTCAATGTGCTGGTTTCTAATGGGCGGTTTAGTGATGCCAAAGATCTCTTCTTGAGGTGTAAAGAACTGGGTTTTCGACCGAATTCGGTTTCTTTCAATATAATGATGAAGGGTTGGTTGGAAAGGGGTGAGTTGGAGAATGCCTGCCAAGTGTTTGATGAAATGCTTGAGAGAGAGATTCAGCCTAGTGTTGTTAGTTATAATAGTTTGATTGGGTTTTTGTGTAAGAGGGGTGACGTGGACAAGGCTACGAGGTTACTTGATGATGTAATTAAGAAAGGGAACCGTCCTAATGCTGTTACTTATGCATTGTTAATGGAAGGCTTGTGTTCTTTGGGGAAGTATAATGAAGCCAAGAAGATGATGTTCGATATGGAGTACCGAGGTTGTAAACCAAGGGTTGTTAACTTTGGGGTTTTAATGACTGATCTTACAAAAAGAGGGAAGCTTGTGGGAGCACAATCATTACTTCTTGAGATGAAGAAGAAAAAGTTAAAGCCAGATGTTGTCATATACAACATATTAGTGAACTTTTTGTGTAAAGAAGGAAGAGTAGAGGAGGCTTATAAGGTGCTTGTTGATATGAAAGTGAAAGGATGTGAGCCTAATGCAGCCACTTATAGGACGCTGGTTGATGGGTTTTGTCAAGTTGGTGAATATGAAAGGGGTTTGAGTATTCTCAATGCAATGCTCATGAGCAGGCATTGCCCTCCCTCGGAAAGCTTCTCTTGTTTGGTTATGGGATTGATCAAGTGTGGAAAAATGGATGATGCTTGCTTTGTTTTAGAAGAGATGGAAAAGAGGAGTATGAGATTCCAACTTGTGTTGTGGGAATCTCTGGTAAGGGATGCTTGTAGTGTTAGTAATTCAGTTGATAAACTTGTATGTGAACTAACCTCTGCCCATTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_384882.p1 GENE.R_Transcript_384882~~R_Transcript_384882.p1 ORF type:complete len:456 (-),score=74.50,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|0.72,PPR_2|PF13041.2|5.3e-10,PPR_2|PF13041.2|2.4e-13,PPR_2|PF13041.2|1.8e-15,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|1.6e-19,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|0.065,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|3.5e-06,PPR_1|PF12854.3|3.1e-10,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|6.1,PPR_1|PF12854.3|4.3e-13,PPR_1|PF12854.3|5.8e-08,PPR_1|PF12854.3|0.0065,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|0.16,PPR|PF01535.16|0.00029,PPR|PF01535.16|7e-05,PPR|PF01535.16|7.9e-06,PPR|PF01535.16|0.00032,PPR|PF01535.16|0.52,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00059,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|0.00056,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.081,TPR_12|PF13424.2|0.91,TPR_12|PF13424.2|1.6,TPR_12|PF13424.2|1.6,TPR_12|PF13424.2|4.2e+02,TPR_12|PF13424.2|2.1e+03,TPR_14|PF13428.2|5e+02,TPR_14|PF13428.2|1.1e+04,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|6.1,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|6e+03,TPR_14|PF13428.2|1.6e+03 R_Transcript_384882:156-1523(-)
MKDMFKLQKLKPAQLIIQQLRHQSTRTSTSKTRTKKRRSNPRKPIPFLADLKQLHDPEEALSLFNHYAQMGFKHHYPSFSSLLYKLARSKSFHHIDPLLIFIKDRNFRCRESLFIALMNHYGKSHLVDKAIDLFHQIPTFNCERTLQSFNTLLNVLVSNGRFSDAKDLFLRCKELGFRPNSVSFNIMMKGWLERGELENACQVFDEMLEREIQPSVVSYNSLIGFLCKRGDVDKATRLLDDVIKKGNRPNAVTYALLMEGLCSLGKYNEAKKMMFDMEYRGCKPRVVNFGVLMTDLTKRGKLVGAQSLLLEMKKKKLKPDVVIYNILVNFLCKEGRVEEAYKVLVDMKVKGCEPNAATYRTLVDGFCQVGEYERGLSILNAMLMSRHCPPSESFSCLVMGLIKCGKMDDACFVLEEMEKRSMRFQLVLWESLVRDACSVSNSVDKLVCELTSAHS*

Click here to download the sequence:
Link to NCBI Protein BLAST