Transcript Information: R_Transcript_38529.p1


Annotated TAIR IDAT3G15290.1
Annotated Gene Name3-hydroxyacyl-CoA dehydrogenase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5145054-5146613 | Forward length=294
E-Value1.2E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4208830734032
Replicate 25.5538601101175
Replicate 37.7587337019226
Condition 2: 8 Hour
Replicate 110.110292623379
Replicate 220.269057410881
Replicate 320.903629004768
Condition 3: 24 Hour
Replicate 19.0350080057416
Replicate 28.3952275777036
Replicate 313.626861305068


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38529.p1 GENE.R_Transcript_38529~~R_Transcript_38529.p1 ORF type:complete len:310 (+),score=61.86,3HCDH_N|PF02737.14|3.6e-63,3HCDH|PF00725.18|3.8e+03,3HCDH|PF00725.18|6.3e-33,NAD_binding_2|PF03446.11|1.4e-06 R_Transcript_38529:216-1145(+)
ATGGGAAACTTATACCCAGAAAACAAAGAAACAATGGTGGAGATCGATACAATTGGGGTCATAGGGGCAGGCCAAATGGGCTCAGGAATTGCCCAGCTTGCTGCTGTTCATGGCTTCCAAGTTTGGCTTCTTGACTCTGACCCTAATGCCCTCACTAGAGCCTCCAAATCCATCACCAATTCTCTCCAACGTTTTTCTAATAAAGGCCAACTTTCCCAGGCTACTGCTTATGAAGCTCTGCAATGCCTGCACTGTACCACAACTTTGGAGGCTTTGCATTCTGCAGACTTGGTTATTGAAGCGATTGCAGAATCAGAAGTTACTAAGAAAAAGCTATTCACTGAGCTCGACAAGATCACAAAATCTTCTGCCATCTTAGCATCTAACACTAGTTCTATATCCATTACACGGCTTGCTTCTGTAACAAGCCGCCCCAAGCAGGTTATTGGCATGCATTTCATGAATCCTCCTCCTATAATGAAGTTGGTTGAGATTATAAGAGGTGCAGATACATCAGATGAGACTTTCAATGCAACAAAGCTTTTGGCAGAGAGGTTTGGTAAAACAATTGTATGCTCTCAGGACTATTCAGGGTTCATTGTAAACCGAATCTTAATGCCTATGATAAATGAAGCGTTTTTCACATTGTATACTGGGGTGGCAACCAAGGAAGACATTGATACAGGAATGAAGCTAGGGACAAACCAACCAATGGGTCCACTTGAGCTTGCAGATTTCATTGGGTTAGATGTTTGTCTATCGATACTGAAAGTTCTTCATGCTGGCCTCGGGGATGTTAAGTATGCTCCTTGCCCTCTTCTTGTTCAGTATGTTGATGCTGGTCGTCTTGGGAGAAAGTGTGGCATTGGGGTATATGACTATCGGAAAACGCCAAACACTATGAAAATCAAACAGCCTGCCAGACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38529.p1 GENE.R_Transcript_38529~~R_Transcript_38529.p1 ORF type:complete len:310 (+),score=61.86,3HCDH_N|PF02737.14|3.6e-63,3HCDH|PF00725.18|3.8e+03,3HCDH|PF00725.18|6.3e-33,NAD_binding_2|PF03446.11|1.4e-06 R_Transcript_38529:216-1145(+)
MGNLYPENKETMVEIDTIGVIGAGQMGSGIAQLAAVHGFQVWLLDSDPNALTRASKSITNSLQRFSNKGQLSQATAYEALQCLHCTTTLEALHSADLVIEAIAESEVTKKKLFTELDKITKSSAILASNTSSISITRLASVTSRPKQVIGMHFMNPPPIMKLVEIIRGADTSDETFNATKLLAERFGKTIVCSQDYSGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNQPMGPLELADFIGLDVCLSILKVLHAGLGDVKYAPCPLLVQYVDAGRLGRKCGIGVYDYRKTPNTMKIKQPARL*

Click here to download the sequence:
Link to NCBI Protein BLAST