Transcript Information: R_Transcript_38550.p1


Annotated TAIR IDAT1G66120.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24612640-24614690 | Forward length=572
E-Value8E-234
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.047290277432
Replicate 21.5579042467405
Replicate 32.317713753405
Condition 2: 8 Hour
Replicate 10.53678961941684
Replicate 20.22624838287877
Replicate 30.33670778553838
Condition 3: 24 Hour
Replicate 11.7421607508376
Replicate 20.78104626762584
Replicate 31.6978657935873


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38550.p1 GENE.R_Transcript_38550~~R_Transcript_38550.p1 ORF type:complete len:593 (+),score=98.57,AMP-binding|PF00501.24|3.4e-94,AMP-binding_C|PF13193.2|8e-22 R_Transcript_38550:112-1890(+)
ATGGACAAGTTCATCAAGAGTGAAGCAAATTATACAGCTCTTACACCTCTAAACTTCTTGAAAAGAGCAGCCATGTCTTATGGTGATCGAACCTCCATCATCTATGGTGAAGCTCGTTTCACTTGGGCCCAAACCTATGACCGTTGCCGCCGCCTTGCTTCTTCCCTCCAATCCCTTGGCATAGCCAAGAATGACGTGGTGTCAGTGCTAGCTCCAAATATACCAGCAGTTTATGAGATGCACTTTGCGGTACCCATGGCAGGAGCAGTGCTCAACACCATCAACACAAGGCTTGATGCCAACACTATCAAGACAATCCTTAGCCATTCTGAGGCAAAGATGCTTTTTGTGGATTATGAGTATATTCAATTGGCATGTCAAGCTTTTCAGCTTCTAAAGGCTGATAAACCTTCAAGCTTACCATTTGTTGTTATGATTAGTGAGATTGATGGCATTTCAAGTGTTCATCAAGGTGAATTAAGATATGAGCAACTAATACTCACTGCTACTGATCCAAGTTTATTAAAAGATGAGTCCTCTGCTATTCCCTTGGTTGAGGTTGATTCCCCCTCGAATCGTAGGCATGGTGGTGGTAAGTTGGAATATGAACACTTGATTTCTATGGGGAATCCAAATTTTATGCCATTAGAGGTTGAGGATGAGTGGGATCCGATCACTCTCAATTACACCTCCGGCACCACATCGGCACCCAAAGGGGTGGTGTATAGCCACCGCGGGGCGTATTTGAGCACCCTGAGTTTGATTCTAGGGTGGGAGATGGGGACTGAATCTGTTTACTTATGGACCTTACCGATGTTCCATTGTAATGGTTGGACTTTTACATGGGGGATTGCTGCGCGAGGTGGAACCAATGTATGCATCCGTAACACAACAGCCTCAGAGATCTACAAAAGTATTGCCCTTCATGGGGTCACCCACATGTGCTGTGCACCTGTTGTGTTCAACATCTTACTGGAAGCGAACCCTGAGGAACGCGTAAGAATTAGGTCCCCGGTTCAAATCCTCACTGGCGGCGCTCCTCCTCCAGCTGCACTGCTAGAGAAGATTGAACAGATGGGATTCCATGTGGTCCATGCCTATGGATTAACAGAGGCAACAGGGCCCGCCTTAGTGTGTGAGTGGCAGAGAAAGTGGGATAGCTTTTCGATTGAGAAGCAAGCACGCTTGAAAGCACGCCAAGGAGTCAGTGTCTTAACCGTGGCAGATGTAGATGTTAAGGATGTGAAGACTAAGCAGAGTGTTCCTCGTGATGGAAAAACAATGGGGGAAATCGTACTCAGAGGGAGTGGAATCATGAAAGGGTACCTTAAGAATGAGGATGCTACAACACAAGCTTTCAAGCATGGATGGTTCCACACGGGTGACATCGGAGTGATCCATCATGATGGATACATAGAGATTAAGGATAGGTTAAAAGATGTGATCATTTCTGGTGGGGAAAACATCAGTAGTGTGGAGGTGGAGAATGTGATTTTTCGACACCAGAAAGTGTCGGATGTGGCGGTGGTGGCAATGCCCCACCCACTGTGGGGTGAAACTCCTTGTGCTTTTGTTGTCCCAAAAGATGAAAATGTAAAGGATGTCACAGAGGAACAAATCTTGATGCATTGCAGAAGCAACCTTCCGCGTTATATGGTGCCTAAGAAGGTGGTGTTTGTGAAAGATTTGCCAAAAGGAAATGGGAAAGTTCGGAAGGGAGAATTAAGGGAGATTGCCAAGAAATTTACAGACCAACCTATAGCATTGTCTCGCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38550.p1 GENE.R_Transcript_38550~~R_Transcript_38550.p1 ORF type:complete len:593 (+),score=98.57,AMP-binding|PF00501.24|3.4e-94,AMP-binding_C|PF13193.2|8e-22 R_Transcript_38550:112-1890(+)
MDKFIKSEANYTALTPLNFLKRAAMSYGDRTSIIYGEARFTWAQTYDRCRRLASSLQSLGIAKNDVVSVLAPNIPAVYEMHFAVPMAGAVLNTINTRLDANTIKTILSHSEAKMLFVDYEYIQLACQAFQLLKADKPSSLPFVVMISEIDGISSVHQGELRYEQLILTATDPSLLKDESSAIPLVEVDSPSNRRHGGGKLEYEHLISMGNPNFMPLEVEDEWDPITLNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGTESVYLWTLPMFHCNGWTFTWGIAARGGTNVCIRNTTASEIYKSIALHGVTHMCCAPVVFNILLEANPEERVRIRSPVQILTGGAPPPAALLEKIEQMGFHVVHAYGLTEATGPALVCEWQRKWDSFSIEKQARLKARQGVSVLTVADVDVKDVKTKQSVPRDGKTMGEIVLRGSGIMKGYLKNEDATTQAFKHGWFHTGDIGVIHHDGYIEIKDRLKDVIISGGENISSVEVENVIFRHQKVSDVAVVAMPHPLWGETPCAFVVPKDENVKDVTEEQILMHCRSNLPRYMVPKKVVFVKDLPKGNGKVRKGELREIAKKFTDQPIALSRL*

Click here to download the sequence:
Link to NCBI Protein BLAST