Transcript Information: R_Transcript_3858.p1


Annotated TAIR IDAT1G26460.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9151816-9154407 | Forward length=630
E-Value1.4E-279
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.581435378827
Replicate 221.737742806601
Replicate 321.546305347264
Condition 2: 8 Hour
Replicate 118.944120232058
Replicate 222.504450905977
Replicate 326.834082474119
Condition 3: 24 Hour
Replicate 131.101748475413
Replicate 229.206402222675
Replicate 331.619477075775


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3858.p1 GENE.R_Transcript_3858~~R_Transcript_3858.p1 ORF type:complete len:623 (+),score=89.41,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|5.7e-05,PPR_2|PF13041.2|13,PPR_2|PF13041.2|2.9e+02,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.00019,PPR_3|PF13812.2|86,PPR_3|PF13812.2|57,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|57,PPR_3|PF13812.2|6.4e+02,PPR_3|PF13812.2|89,PPR_3|PF13812.2|71,PPR_3|PF13812.2|0.0048,PPR_3|PF13812.2|0.0098,PPR|PF01535.16|0.84,PPR|PF01535.16|83,PPR|PF01535.16|66,PPR|PF01535.16|2e+02,PPR|PF01535.16|0.0057,PPR|PF01535.16|0.063,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|7.8e+03,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|0.72 R_Transcript_3858:198-2066(+)
ATGGCGATGCTCATCAAATCCCGAACCCTAATCAAAACCCTAAACCCCACCCTCACCACTCTTACCACCATCAAATCAATCACCACTTTCTCTTTCCTCAATCAAGAACCTCAACTCGACGAACCCCCTACTCCCTCCCCCTCCCCCTCCCCTCTCCCTCCAAATCCATCCTCCGGCAGCCCTCTCTACCACCAAAACTGGCGTAACCCTAACCCTACCACCATCCCAATCTCCTCAACCACCAATACCCAATCTATAGTCCCCTTGGGGATCCTCAGCCACACGGCTCCCTACCAGATCAAAGCCCTAGCCCAAAGCCACGATGTCAATTCGTTAAAAAACGTCTTCGCCGACTGGATGACTCAGCAGAAATGGAACGACATGATTCAGGTCTTTGAGCTCTGGATCAAGTCTCTGGATAAATATGGAAAGCCTAATCGCCCTGATGTTTTGCTTTATAATCATTATATGAGGGCTTTTTTGATGCTCGGCGCTACGGCCGGGGACCTCCTTGATGTTGTTGCTAGGATGGAGGATTTTGCTATCGAGCCTAATGCTGCGTCATTTAATTTGGTCCTCAAGGCTATGCATAATGCTGGCGAAGCTCAGGCCGCTGAGAAGCTCCTTGAGAGGATGCTGCATTCTGGAAAAGAATCTCAGCCTGATGATGAATCATATAATTTGGTTATTGGCATGCTGTTTCAACAGCAACAGACTGATGCTGCCTTGAAGTATATAGATATAACACTGAAATCTGGTTATATGCTTTCAAAAAAGGTGTTTTATGATTGTGTACAAAGCTGCACTAATACGAGGAGATTGGACAGTTTGGTTTCAGTTATAGAGAAATGCAAGGCTATGGAAAACAATAAAGATCTCTGCCCCAACTGGTTTTTGTGCAACCAACTTGCAAACGTTGCAATAAAGAGTGAAAATAGCAAGCTGGCCTTTCTAGCCTTGGAGTTCATGGCAAAATGGATTGCACGAGGGGAGCAAGCGAGGCCCCCTAATTATTACCCTGTTGACGAAGGATTGGTGATCTCTGCTCTTTCCACAGCAGGTCAAACATACAACTCCACTCTTTTGGATGCATCATGGGCCATCTTAAAGAGGTCTCTGCGTGAAAAGAAGCATCCTCAACCTGCAACCTACTTAGCTAAAATATCTGGCCTTGCATCGCTGGGGAACTTGCAGAGGGCTTTTACTACTTTACATGAACTGGAAATAGTGCTTGCAAATTCTGCTAATGAATCAGCTGAAGATCTGCTTTGTCCATTTACTTCTCTCTATCAATTGGTTGTGGCCTGTTCCAAGAAAGGTTTCGAAACATTGGATTTGGTATATTTTCAACTGGAGAATCTGAGTCGTGCAAACCCTCCTTACAAATCTGTTGCTGCCTTAAATTGTATAATTTTGGGCTGTGCGAATATATGGGACCTTGACCGGGCTTACCAAACATTTGAGGCCATTGGTTCCACATTTGGGTTGACTCCCAATATACACTCATACAATGCTTTAATGTGTGCATTTGGAAAACTGAAAAAGACCTTTGAAGCTACTAGGGTATTTGAACATTTATGTAGCCTGGGTGTGAAACCAAATGCGATGTCGTATAATTTACTTGTTGATGCTCATCTCATCAACCGAGATCCAAAGGCTGCCCTTGCTGTAATTGACACGATGTTGGAAGCTGGCTTCGAACCGTCCAAAGAGACATTGTTAAAGGTGAGAAGGCGATGCATTCGGGAGATGGATTATGAAAGCAATGACCGTGTAGAATCCCTTGCTAAGCAGTGCAAAATCTTTTTGGGTACCGAAAATCGAAGGAACATTTTGTTTAATCTGGAGTACAGCACCGAGTACGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3858.p1 GENE.R_Transcript_3858~~R_Transcript_3858.p1 ORF type:complete len:623 (+),score=89.41,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|5.7e-05,PPR_2|PF13041.2|13,PPR_2|PF13041.2|2.9e+02,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.00019,PPR_3|PF13812.2|86,PPR_3|PF13812.2|57,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|57,PPR_3|PF13812.2|6.4e+02,PPR_3|PF13812.2|89,PPR_3|PF13812.2|71,PPR_3|PF13812.2|0.0048,PPR_3|PF13812.2|0.0098,PPR|PF01535.16|0.84,PPR|PF01535.16|83,PPR|PF01535.16|66,PPR|PF01535.16|2e+02,PPR|PF01535.16|0.0057,PPR|PF01535.16|0.063,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|7.8e+03,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|0.72 R_Transcript_3858:198-2066(+)
MAMLIKSRTLIKTLNPTLTTLTTIKSITTFSFLNQEPQLDEPPTPSPSPSPLPPNPSSGSPLYHQNWRNPNPTTIPISSTTNTQSIVPLGILSHTAPYQIKALAQSHDVNSLKNVFADWMTQQKWNDMIQVFELWIKSLDKYGKPNRPDVLLYNHYMRAFLMLGATAGDLLDVVARMEDFAIEPNAASFNLVLKAMHNAGEAQAAEKLLERMLHSGKESQPDDESYNLVIGMLFQQQQTDAALKYIDITLKSGYMLSKKVFYDCVQSCTNTRRLDSLVSVIEKCKAMENNKDLCPNWFLCNQLANVAIKSENSKLAFLALEFMAKWIARGEQARPPNYYPVDEGLVISALSTAGQTYNSTLLDASWAILKRSLREKKHPQPATYLAKISGLASLGNLQRAFTTLHELEIVLANSANESAEDLLCPFTSLYQLVVACSKKGFETLDLVYFQLENLSRANPPYKSVAALNCIILGCANIWDLDRAYQTFEAIGSTFGLTPNIHSYNALMCAFGKLKKTFEATRVFEHLCSLGVKPNAMSYNLLVDAHLINRDPKAALAVIDTMLEAGFEPSKETLLKVRRRCIREMDYESNDRVESLAKQCKIFLGTENRRNILFNLEYSTEYA*

Click here to download the sequence:
Link to NCBI Protein BLAST