Transcript Information: R_Transcript_385974.p1


Annotated TAIR IDAT5G27390.1
Annotated Gene NameMog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9674634-9676118 | Reverse length=241
E-Value4E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4934240781134
Replicate 20
Replicate 30.62472920716779
Condition 2: 8 Hour
Replicate 10.66779631674305
Replicate 20
Replicate 30.49504392601055
Condition 3: 24 Hour
Replicate 10.41741467686735
Replicate 21.0025117677535
Replicate 30.3979582670345


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_385974.p1 GENE.R_Transcript_385974~~R_Transcript_385974.p1 ORF type:5prime_partial len:110 (-),score=32.48 R_Transcript_385974:44-373(-)
TGCATTCGTGTTCCTCCCCAGTTTGAGGATATTATGGAGCCTGAGGATTTCAATGCTGGGTTGTCTCTTTATGGAGACAAGGCAAAGCCCAAGACATTTGCAGCTCGGTTTGCATCTTCTGACGGGTCTGAGGTGGTGAGTGTTATTATTAAGCCATCAAATCAACTGAAGATCACCTTCCTTGAGGCCCAGGATGTTACTGACTTGGGTTCACTTAAGGAGGCAGCAAAGATTTTCATCCCAGGCGGGGCAACAATATTTGCAGCTCGAACTATAAAAATAAAAGAAGATGAAGGTTTCAGGTACTTGATCATCATTGCACATTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_385974.p1 GENE.R_Transcript_385974~~R_Transcript_385974.p1 ORF type:5prime_partial len:110 (-),score=32.48 R_Transcript_385974:44-373(-)
CIRVPPQFEDIMEPEDFNAGLSLYGDKAKPKTFAARFASSDGSEVVSVIIKPSNQLKITFLEAQDVTDLGSLKEAAKIFIPGGATIFAARTIKIKEDEGFRYLIIIAHF*

Click here to download the sequence:
Link to NCBI Protein BLAST