Transcript Information: R_Transcript_38710.p1


Annotated TAIR IDAT1G25500.2
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8955437-8957793 | Reverse length=488
E-Value2E-273
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.979870349209
Replicate 25.4809619560617
Replicate 36.071665386932
Condition 2: 8 Hour
Replicate 14.6709983333098
Replicate 27.0046135888051
Replicate 35.6131486657422
Condition 3: 24 Hour
Replicate 15.2554016545347
Replicate 25.9345475729666
Replicate 39.6692671307579


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38710.p1 GENE.R_Transcript_38710~~R_Transcript_38710.p1 ORF type:complete len:498 (+),score=63.91,Choline_transpo|PF04515.8|1.3e+03,Choline_transpo|PF04515.8|6.1e-52 R_Transcript_38710:172-1665(+)
ATGAACGACTCTCAAAGCCCTTCTTCTTCTTCTTCCTATAATTCTGTCTCCATTTCCCCCAACGGCCAGGAGGTCGCTCATAATCAAAGAAGCATCAATGGCACGTATGCTTTGTCATTTGAGCAATCAAGACATTGGCGAGATGTGTTCTGGTTAGCAGTTTTCATTGTGCATTTGGGAGGGCTAGGCCTTCTTCTAGCAGTACTTGGACTCAACAGATTTAAGATGAACGATAGACTAGATATTGATAAATACACGGATGGGTTTCTGGAGAACCACCATGGTCTCACGGAGGACTATTGGCCTTTGTATGCAGTTGCTGGCGGGGTTGGTACATTCCTTGGATGGACTTGGTTATTATTGCTTGGTTGTCAGGCCAATCACATGATGAAAGTTTCAGTGCACATATTAACTACCTATCTTGCACTGGTTAGTATTTTTTGTTTTTGGACCAAGCAGTTCTTCTGGGGCATTGCTTTTGCAATTGGAGCAGTTTTGCAGTTTTTGTATGTCATCTCAGTTATAGACAGACTTCCATTTACGATGATGGTGCTGCAGAAAGCTGCAAAGATGGTGTGGAGGCTTCCTAAAGTTATGAGCGTAGCATATGCCTTTATTCTGGTCATGCTTTCATGGATGGTTCTATGGTCCTTTGGAGCTTCTGGTGTTGTGGCTTCAAGCATAGGTGATAGCGGAAGATGGTGGCTTCTTGTGGTACTTTCTGTTAGTTTATTTTGGACAGGTGCAGTCCTTTGTAATACAGTTCACGTCATAGTTTCGGGAATGGTTTTTCTTGTTCTCATTCATGGTGGTCAAGAAACACCATCTATGCCTCCAAACTCATTGATGAAATCTTTGCGTTATGCTGTAACAACATCCTTTGGAAGCATCTGCTATGGGTCACTTTTTACAGCTGCTATCCGCACCCTCAGATGGGAGATAAGAGGATTTCGTTCGAAGATTGGCAATAATGAGTGCTTACTTTGCTGTGTTGACTTCCTATTCCATCTTGTGGAAACACTTGTTCGGTTCTTCAACAAATATGCATATGTGCAGATTGCGGTCTCCGGTAAAAGCTTTAATCATTCAGCAAGAGATGCCTGGGAACTGTTCCAGTCAACTGGCGTTGAAGCTCTAGTTGCATACGATTGTTCTGGTGCTGTCCTTTTGATGGGAACTGTCTTGGGAGGGCTAATTACTGGGACTTGTGCAGGAGTTTGGACATGGTTTCGATCAAATGACAAAGTCTTAATGGTCGGCTCCACCTCAATCCTGATGGGGATGATTTTGGTTGGGCTGGCAATGGTGGTGGTGGAAGGTGCTGTTACAGTCATGTACATATGTTATGCTCTTGATCCCCTATTCATTCATAGATGGGATGTTGATTTCTTCAACCAAATGTCAGAAATGCTTCATCAGCGCCTGCAACATAGGAGCGCACGAGGTCGACAAGTTTTGACCCAGAACACACTCGACTTACGCATACAAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38710.p1 GENE.R_Transcript_38710~~R_Transcript_38710.p1 ORF type:complete len:498 (+),score=63.91,Choline_transpo|PF04515.8|1.3e+03,Choline_transpo|PF04515.8|6.1e-52 R_Transcript_38710:172-1665(+)
MNDSQSPSSSSSYNSVSISPNGQEVAHNQRSINGTYALSFEQSRHWRDVFWLAVFIVHLGGLGLLLAVLGLNRFKMNDRLDIDKYTDGFLENHHGLTEDYWPLYAVAGGVGTFLGWTWLLLLGCQANHMMKVSVHILTTYLALVSIFCFWTKQFFWGIAFAIGAVLQFLYVISVIDRLPFTMMVLQKAAKMVWRLPKVMSVAYAFILVMLSWMVLWSFGASGVVASSIGDSGRWWLLVVLSVSLFWTGAVLCNTVHVIVSGMVFLVLIHGGQETPSMPPNSLMKSLRYAVTTSFGSICYGSLFTAAIRTLRWEIRGFRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVSGKSFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTVLGGLITGTCAGVWTWFRSNDKVLMVGSTSILMGMILVGLAMVVVEGAVTVMYICYALDPLFIHRWDVDFFNQMSEMLHQRLQHRSARGRQVLTQNTLDLRIQS*

Click here to download the sequence:
Link to NCBI Protein BLAST