Transcript Information: R_Transcript_38713.p2


Annotated TAIR IDAT1G25500.2
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8955437-8957793 | Reverse length=488
E-Value2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6710457212067
Replicate 20.59144508214924
Replicate 31.4518354814463
Condition 2: 8 Hour
Replicate 10.17243566864257
Replicate 22.0471229854606
Replicate 33.067877851333
Condition 3: 24 Hour
Replicate 11.7784216866531
Replicate 20.46595617374459
Replicate 30.77069382700343


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38713.p2 GENE.R_Transcript_38713~~R_Transcript_38713.p2 ORF type:3prime_partial len:142 (+),score=19.89,Choline_transpo|PF04515.8|5.9e-31 R_Transcript_38713:468-890(+)
ATGGTGGCTTCTTGTGGTGAGCGGGTACTTTCTGTTAGTTTATTTTGGACAGGTGCAGTCCTCTGTAATACAGTTCATGTCATAGTTTCAGGAATGGTTTTTCGTGTTCTCATTCATGGTGGTCAAGAAACACCATCTATGCCTCCAAACTCATTGATGAAATCTTTGCGTTATGCTGTAACAACATCCTTTGGAAGCATCTGCTATGGGTCACTTTTTACAGCTGCTATCCGCACCCTCAGATGGGAGATAAGAGGATTTCGTTCGAAGATTGGCAATAATGAGTGCTTACTTTGCTGTGTTGACTTCCTATTCCATCTTGTGGAAACACTTGTTCGGTTCTTCAACAAATATGCATATGTGCAGATTGCGGTCTCCGGTAAAAGCTTTAATCATTCAGCAAGAGATGCCTGGGAACTGTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38713.p2 GENE.R_Transcript_38713~~R_Transcript_38713.p2 ORF type:3prime_partial len:142 (+),score=19.89,Choline_transpo|PF04515.8|5.9e-31 R_Transcript_38713:468-890(+)
MVASCGERVLSVSLFWTGAVLCNTVHVIVSGMVFRVLIHGGQETPSMPPNSLMKSLRYAVTTSFGSICYGSLFTAAIRTLRWEIRGFRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVSGKSFNHSARDAWELF

Click here to download the sequence:
Link to NCBI Protein BLAST