Transcript Information: R_Transcript_387583.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14720129802192
Replicate 20.1128833355715
Replicate 30.12315450320512
Condition 2: 8 Hour
Replicate 10.46075552320085
Replicate 20.060109897422542
Replicate 30.24397326102671
Condition 3: 24 Hour
Replicate 10.24685814223338
Replicate 20
Replicate 30.29418957912496


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_387583.p1 GENE.R_Transcript_387583~~R_Transcript_387583.p1 ORF type:5prime_partial len:372 (+),score=44.87,RVT_3|PF13456.2|6.2e-22,zf-RVT|PF13966.2|4.4e-18,zf-RVT|PF13966.2|1.1e+03,RNase_H|PF00075.20|4.9e-07 R_Transcript_387583:3-1118(+)
GATGGGTTATATTGGAATGGCACTTCTTCTGGAGGTTTTACACTCAAGTCTGCCTTAAGCATAATTCGTAAAGAGGTTGATCTTCCCCCTTGCCGAGACTGGAAAACGCTATGGAGTGTCCCGCTCCCACAACGTATTAAGTTTTTTCAGTGGCTGGCTTTCCATGATCGAATTATGTCCAATGAGAACAGATATCTTAGAGGCTTGATTGAAGATGCTCGGTGCAAGGTGTGTGGGAAAGCTGAGGAAACGACGGCTCATATCTTGAGAACTTGCCCAGCCGCCACAAGTTTATGGCGAAAACTTGGCCTGACAGGGGAGGCACTCTATGCTCTACCGCTCAAGGAATGGATTGCAAGAAGTCTTCATGGAGACAGTGGTCAACAACAGAAGATCATCACCTTTGGGGTCACGATATGGAGGCTGTGGCGATGGCGTAACGAGCGTGTTTTCAATGATGCTGCCAAAATCCCCATTAATCAAATTGCGTTCATCAAGGAAAGGGTGCAAGAGATTGAGCATGCCTTTGGAGTAGGCCAAAGCTTACTGCTGGATAAGGACCCGCGCCGAGTAGAAATTTTGACCAAATGGTGCCCCCCACCAGAGGGATGGATGAAGCTTAATACGGATGGGGCTTCTCGTGGCAATCCTGGTAGAGCAGGAGGGGGTGGTGTCATCCGCGATTCTTTTGGCAGGTTCAAATTTGGTTTCTCGGCCTCCTTTGGCAGATGCACGAGTGTTAGGGCGGAGCTTTGGGCCATTATGTTAGGACTTTCTCAGGCTTGGGAACTAGGATATAGGCATGTACTACTTGAGACTGATTCAATGGTAGTTGTGAAGATGCTGCAAAGTCAGGAGCCTAGTCCCTCGGCTAACTATCACTTACTCACTAAGTGTAAACAAGTCATAAGAAGGGAAGGTTGGGAAGTGTTGGTCAACCACTGCTACAGAGAAAATAATCAAGCTGCTGATAAGTTAGCGAACATGGGAGTCGAGCAATCTGAGAAAATGCTACTGTACCATGATCCTCCTCCCGCGATAGGAAGACTGCTGGGATATGATCTGAGTGGTGTTGCTTGGCCTAGGGTAGTTCCTGGTAATTTAGTACGTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_387583.p1 GENE.R_Transcript_387583~~R_Transcript_387583.p1 ORF type:5prime_partial len:372 (+),score=44.87,RVT_3|PF13456.2|6.2e-22,zf-RVT|PF13966.2|4.4e-18,zf-RVT|PF13966.2|1.1e+03,RNase_H|PF00075.20|4.9e-07 R_Transcript_387583:3-1118(+)
DGLYWNGTSSGGFTLKSALSIIRKEVDLPPCRDWKTLWSVPLPQRIKFFQWLAFHDRIMSNENRYLRGLIEDARCKVCGKAEETTAHILRTCPAATSLWRKLGLTGEALYALPLKEWIARSLHGDSGQQQKIITFGVTIWRLWRWRNERVFNDAAKIPINQIAFIKERVQEIEHAFGVGQSLLLDKDPRRVEILTKWCPPPEGWMKLNTDGASRGNPGRAGGGGVIRDSFGRFKFGFSASFGRCTSVRAELWAIMLGLSQAWELGYRHVLLETDSMVVVKMLQSQEPSPSANYHLLTKCKQVIRREGWEVLVNHCYRENNQAADKLANMGVEQSEKMLLYHDPPPAIGRLLGYDLSGVAWPRVVPGNLVRS*

Click here to download the sequence:
Link to NCBI Protein BLAST