Transcript Information: R_Transcript_38783.p2


Annotated TAIR IDAT3G04240.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)SEC
Annotation TypeOrtholog
Chromosome Positionchr3:1114187-1120722 | Reverse length=977
E-Value2.7E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7993997498417
Replicate 20.68965950272512
Replicate 30.66880985682197
Condition 2: 8 Hour
Replicate 10.089364470610384
Replicate 20.57126340470182
Replicate 31.3249350817801
Condition 3: 24 Hour
Replicate 10.58651332333551
Replicate 20.64394916468839
Replicate 31.4378784100882


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38783.p2 GENE.R_Transcript_38783~~R_Transcript_38783.p2 ORF type:complete len:274 (+),score=35.32,TPR_11|PF13414.2|4.7e-05,TPR_11|PF13414.2|1.9e-08,TPR_11|PF13414.2|2.9e-14,TPR_11|PF13414.2|1.1e-07,TPR_1|PF00515.24|29,TPR_1|PF00515.24|0.011,TPR_1|PF00515.24|1.8e-05,TPR_1|PF00515.24|1.7e-09,TPR_1|PF00515.24|1.1e+02,TPR_2|PF07719.13|4.8,TPR_2|PF07719.13|0.3,TPR_2|PF07719.13|0.0017,TPR_2|PF07719.13|2.5e-08,TPR_2|PF07719.13|2e+02,TPR_17|PF13431.2|6.2e+02,TPR_17|PF13431.2|0.59,TPR_17|PF13431.2|0.35,TPR_17|PF13431.2|7.7e-06,TPR_17|PF13431.2|0.0029,TPR_12|PF13424.2|57,TPR_12|PF13424.2|7.4e-08,TPR_12|PF13424.2|4.4e-08,TPR_16|PF13432.2|0.003,TPR_16|PF13432.2|6e-07,TPR_16|PF13432.2|7.8e-07,TPR_8|PF13181.2|3e+02,TPR_8|PF13181.2|7.5,TPR_8|PF13181.2|0.001,TPR_8|PF13181.2|3.4e-05,TPR_19|PF14559.2|5.2,TPR_19|PF14559.2|0.16,TPR_19|PF14559.2|1.8,TPR_19|PF14559.2|0.00034,TPR_19|PF14559.2|8.6,TPR_7|PF13176.2|4.4e+02,TPR_7|PF13176.2|2.1e+02,TPR_7|PF13176.2|0.0096,TPR_7|PF13176.2|3.9e-05,TPR_7|PF13176.2|7.7e+02,TPR_14|PF13428.2|67,TPR_14|PF13428.2|56,TPR_14|PF13428.2|0.0085,TPR_14|PF13428.2|3.4e-05,TPR_14|PF13428.2|1.1e+03,ANAPC3|PF12895.3|0.002,ANAPC3|PF12895.3|0.51 R_Transcript_38783:149-970(+)
ATGTTGTCAACAATTTCCCTCCATTTCCCCCCGGTTTCTCAAGATTCCGGCAACACCACCAACACTCACCGGAAACCTCAACAACAACATCATCATCATCAACAACAACAACGGCATAATAACAATCAACAACAAGAACAATCGGAGCTGATTAATTCTCCCGATCTTGGCTCAGATGCTTCCTCTGGTTTCTGTTTAAAGCATTTTAAGGGTTCTGATGAAACTCGTGAAGAGGAAGACATGTTACTAGGCCTTGCACACCAAATGTACAAGTCGGGCAACTATAAACAGGCTTTGGAGAACAGTAATAACGTTTATGAGAGAAACCCATTACGCACGGACAATCTCCTTCTCCTGGGTGCCATATACTATCAGCTGCATGATTTTGATATGTGCATTGCTAGAAATGAAGAAGCTATACAAATTGAGCCACACTTTGCAGAGTGTTTTGGCAACATGGCAAATGCATGGAAGGAAAAAGGAAATGTTGATCTCGCAATTCGATACTACTTGATTGCTATTGAGCTCCGTCCAAATTTTGCTGATGCCTGGTCAAATTTAGCTAGTGCTTACATGCGTAAAGGAAGACTGACTGAGGCAGCCCAATGTTGCCGCCAGGCCCTTGCGTTAAATCCTCTCTTGGTTGATGCGCATAGCAACCTTGGGAATCTGATGAAAGCACAAGGTTTATTGCAAGAAGTAAGTCTTAGCTACGATCTTAGACTTATCTATCTTTTCTGTTTCTTAAAACATTGCCAATGCTTGATAATCTATCCCCCAAGTATAGGTCACTCTTTTAAAGTGGCATCAAAAAATTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38783.p2 GENE.R_Transcript_38783~~R_Transcript_38783.p2 ORF type:complete len:274 (+),score=35.32,TPR_11|PF13414.2|4.7e-05,TPR_11|PF13414.2|1.9e-08,TPR_11|PF13414.2|2.9e-14,TPR_11|PF13414.2|1.1e-07,TPR_1|PF00515.24|29,TPR_1|PF00515.24|0.011,TPR_1|PF00515.24|1.8e-05,TPR_1|PF00515.24|1.7e-09,TPR_1|PF00515.24|1.1e+02,TPR_2|PF07719.13|4.8,TPR_2|PF07719.13|0.3,TPR_2|PF07719.13|0.0017,TPR_2|PF07719.13|2.5e-08,TPR_2|PF07719.13|2e+02,TPR_17|PF13431.2|6.2e+02,TPR_17|PF13431.2|0.59,TPR_17|PF13431.2|0.35,TPR_17|PF13431.2|7.7e-06,TPR_17|PF13431.2|0.0029,TPR_12|PF13424.2|57,TPR_12|PF13424.2|7.4e-08,TPR_12|PF13424.2|4.4e-08,TPR_16|PF13432.2|0.003,TPR_16|PF13432.2|6e-07,TPR_16|PF13432.2|7.8e-07,TPR_8|PF13181.2|3e+02,TPR_8|PF13181.2|7.5,TPR_8|PF13181.2|0.001,TPR_8|PF13181.2|3.4e-05,TPR_19|PF14559.2|5.2,TPR_19|PF14559.2|0.16,TPR_19|PF14559.2|1.8,TPR_19|PF14559.2|0.00034,TPR_19|PF14559.2|8.6,TPR_7|PF13176.2|4.4e+02,TPR_7|PF13176.2|2.1e+02,TPR_7|PF13176.2|0.0096,TPR_7|PF13176.2|3.9e-05,TPR_7|PF13176.2|7.7e+02,TPR_14|PF13428.2|67,TPR_14|PF13428.2|56,TPR_14|PF13428.2|0.0085,TPR_14|PF13428.2|3.4e-05,TPR_14|PF13428.2|1.1e+03,ANAPC3|PF12895.3|0.002,ANAPC3|PF12895.3|0.51 R_Transcript_38783:149-970(+)
MLSTISLHFPPVSQDSGNTTNTHRKPQQQHHHHQQQQRHNNNQQQEQSELINSPDLGSDASSGFCLKHFKGSDETREEEDMLLGLAHQMYKSGNYKQALENSNNVYERNPLRTDNLLLLGAIYYQLHDFDMCIARNEEAIQIEPHFAECFGNMANAWKEKGNVDLAIRYYLIAIELRPNFADAWSNLASAYMRKGRLTEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLLQEVSLSYDLRLIYLFCFLKHCQCLIIYPPSIGHSFKVASKNC*

Click here to download the sequence:
Link to NCBI Protein BLAST