Transcript Information: R_Transcript_387859.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.16940062000898
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_387859.p1 GENE.R_Transcript_387859~~R_Transcript_387859.p1 ORF type:internal len:132 (-),score=30.21,RVT_2|PF07727.10|3.6e-20 R_Transcript_387859:2-394(-)
CCTCCTCCACCACCTCCTCCACTAACTCGGACTATGGTTACAAGATCATATAACAATATTGTTAAGCCTAATCCAAAGTATGCTAATCATGTCTCACTTCATGGTGTTCCCACTCAACCTACAAAGATCACACAAGCCTTGAAAGACCCTCAATGGCGTGCTGCCATGACAGATGAACATGATGCTCTTATTCACAATCATACTTGGGACCTTGTTCCACCTGATCCTTCTCATAATTTGGTTGGTTCCAAGTGGGCTTATCGCATTAAATATGAACCTGATGGTACTATTGATAAGAACAAAGCTCGTCTTGTGGCTAAGGGTTTTCATCAAAGGCCTAGGATTGATTATTCAGAGACGTTCAGCCCTGTTATCAAACCTGCAACAGTCTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_387859.p1 GENE.R_Transcript_387859~~R_Transcript_387859.p1 ORF type:internal len:132 (-),score=30.21,RVT_2|PF07727.10|3.6e-20 R_Transcript_387859:2-394(-)
PPPPPPPLTRTMVTRSYNNIVKPNPKYANHVSLHGVPTQPTKITQALKDPQWRAAMTDEHDALIHNHTWDLVPPDPSHNLVGSKWAYRIKYEPDGTIDKNKARLVAKGFHQRPRIDYSETFSPVIKPATVC

Click here to download the sequence:
Link to NCBI Protein BLAST