Transcript Information: R_Transcript_387931.p1


Annotated TAIR IDAT4G37930.1
Annotated Gene Nameserine transhydroxymethyltransferase 1
Annotated Gene Symbol(s)SHM1, STM, SHMT1
Annotation TypeOrtholog
Chromosome Positionchr4:17831891-17834742 | Reverse length=517
E-Value2E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.528185866138
Replicate 21.6576026644446
Replicate 33.3757297510119
Condition 2: 8 Hour
Replicate 12.9640783883507
Replicate 21.2945773697528
Replicate 32.1973002329942
Condition 3: 24 Hour
Replicate 12.6582724158394
Replicate 21.1608030995041
Replicate 32.6495642515718


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_387931.p1 GENE.R_Transcript_387931~~R_Transcript_387931.p1 ORF type:3prime_partial len:190 (-),score=41.26,SHMT|PF00464.15|4.3e-30,SHMT|PF00464.15|4.1e-63 R_Transcript_387931:3-524(-)
ATGGCACATATTAGTGGGTTGGTCGCAGCTGGTGTAATACCATCACCATTTGATTATGCTGATGTTGTAACCACTACAACTCACAAGTCCCTTCGTGGGCCACGTGGAGCAATGATTTTCTTCAGGAAGGGTGTAAAGGAGATTAACAAACAGAAAGCAATTATGTTGGCAGATATGGCACATATTAGTGGGTTGGTCGCAGCTGGTGTAATACCATCACCATTTGATTATGCTGATGTTGTAACCACTACAACTCACAAGTCCCTTCGTGGGCCACGTGGAGCAATGATTTTCTTCAGGAAGGGTGTAAAGGAGATTAACAAACAAGGGAAGGAGGTATTGTATGACTACGAGGACAAGATAAATCAGGCTGTCTTTCCTGGACTCCAAGGTGGTCCTCACAATCACACAATAACTGCCTTAGCAGTGGCTTTAAAACAGGCTATGACTCCTGAATACAGAGCATACCAGGAGCAAGTCATGAGCAATTCTGCAAAGTTTGCCGAGGCTTTGGCAGGGTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_387931.p1 GENE.R_Transcript_387931~~R_Transcript_387931.p1 ORF type:3prime_partial len:190 (-),score=41.26,SHMT|PF00464.15|4.3e-30,SHMT|PF00464.15|4.1e-63 R_Transcript_387931:3-524(-)
MAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQKAIMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITALAVALKQAMTPEYRAYQEQVMSNSAKFAEALAGS

Click here to download the sequence:
Link to NCBI Protein BLAST