Transcript Information: R_Transcript_388128.p1


Annotated TAIR IDAT1G56690.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21253817-21255931 | Forward length=704
E-Value9E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64270989277179
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.17243566864257
Replicate 20
Replicate 30.51131297522217
Condition 3: 24 Hour
Replicate 10.16167469878665
Replicate 20.46595617374459
Replicate 30.15413876540068


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_388128.p1 GENE.R_Transcript_388128~~R_Transcript_388128.p1 ORF type:3prime_partial len:142 (+),score=23.35,PPR|PF01535.16|1.8,PPR|PF01535.16|5.2e-08,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|2.1e-08,PPR_2|PF13041.2|0.091,PPR_2|PF13041.2|6.3e-07,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|2.3e-07,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|3.2e-06,PPR_1|PF12854.3|0.0002,PPR_3|PF13812.2|10,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.021 R_Transcript_388128:255-677(+)
ATGGGTTGTCCAAGCAATTGCAGAAGATACTGCACTGATGTTGCTCTATCTTACAACGCTCAGATTTTCAGACATGCCCGTCATGGTGATATTCATAAAGCTCGTCATCTTTTCGACAAAAAGATCGACAGAACAGTGTCTTCATGGAACTCTATGATTGCCGGTTACTTCCAAAACCATCGACCCAAGGAAGCACGCCACCTGTTCGACAAAATGCCTGAGAGAAACCTTGTTTCTTTTAACAATTTGGTATCTGGGTATGTGAAAAACAAAATGATAGATGAAGCACGTAAGATGTTTGATTCAATGCCTGAGAGAAATGTGGTTTCTTGGACATCAATGTTAAGAGGGTATTTGCAAGAGGGTATGATGTCGGAGGCGAGTTTGTTGTTTGAAAGGATGCCTGAGAAGAATGTGATTTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_388128.p1 GENE.R_Transcript_388128~~R_Transcript_388128.p1 ORF type:3prime_partial len:142 (+),score=23.35,PPR|PF01535.16|1.8,PPR|PF01535.16|5.2e-08,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|2.1e-08,PPR_2|PF13041.2|0.091,PPR_2|PF13041.2|6.3e-07,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|2.3e-07,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|3.2e-06,PPR_1|PF12854.3|0.0002,PPR_3|PF13812.2|10,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.021 R_Transcript_388128:255-677(+)
MGCPSNCRRYCTDVALSYNAQIFRHARHGDIHKARHLFDKKIDRTVSSWNSMIAGYFQNHRPKEARHLFDKMPERNLVSFNNLVSGYVKNKMIDEARKMFDSMPERNVVSWTSMLRGYLQEGMMSEASLLFERMPEKNVIS

Click here to download the sequence:
Link to NCBI Protein BLAST