Transcript Information: R_Transcript_388268.p1


Annotated TAIR IDAT3G25270.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9203934-9204965 | Reverse length=343
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51057233439773
Replicate 20.58730910255379
Replicate 30.56065441668905
Condition 2: 8 Hour
Replicate 10.42807456201478
Replicate 20.23455470462782
Replicate 30.50773736001082
Condition 3: 24 Hour
Replicate 10.96326463892465
Replicate 20.38558144913597
Replicate 31.1479565395226


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_388268.p1 GENE.R_Transcript_388268~~R_Transcript_388268.p1 ORF type:complete len:286 (+),score=32.20,RVT_3|PF13456.2|5.8e-15,zf-RVT|PF13966.2|1.7e-06,zf-RVT|PF13966.2|3.2e+03 R_Transcript_388268:113-970(+)
ATGAATAATTTAGAAAGAAGGGGTGTTCGGGTTTTCAATTTGTGCCCGTTTTGCTTAGAGACTGAAGAGACAGAGGATCATGTCTTTCTTTACTGTCAGATGGTTCGAAGGGTTTGGCATGCTTGCAGTCTAGGTATTAAACTTGACGCAAATTTTGAGTTGAAGGTATCTGATTGGGTTATGGACTGGTTCAATCTCTTTTGGAAACAGAAAAATGTAAGTGCGATCGCTATCTTTTTGGCTGTTATGTGGGCTATCTGGATTCATCGGAATGCAGTTGTATTTAATGGGGAGAGTCCTGACCCGAGGAAGATTATGGAACTTATTCAACAATGCATCCAAGTGCTGCTGACCAGGGATAAGATTCGGAACGAGAGCATGGAAGGTACTGAACCTATCAATGAGAAGCATCTGGAATTTGTGCATAATAAAGGAAGCCCTCAGGCACGAAGGATATTTTATATTGATGGAGCGTGGAAAAAGAAGTCCTTAACAGCAGGAATAGGGTGGGTGATGTATGATGAGACAAGTTCACTACTTTTGGGTACAGGACATTGCAAGACGTGGGCACGGAGTGCACTCCAAACTGAGTATTTGGCTTTGATATCTGCAATGGAGTATGCGCTTAATGGGGGATTTCTGGATGTACAATTCCTGACCGATTCAAAACTACTGGTATCACACTTACCAAACAAGGATAAGGTTGAATATTCCATTAAGTCTTTGCATCATAAGATCAGTAATTATATTTTGTCTTTTAATTCCTGTCATATTTTACATGTACCTAGGTCTGTTGTCAATGAAGCTCACACAATTGCCGTAAAGGCAAGAAAAGGGGAGCTTCCAAATGTATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_388268.p1 GENE.R_Transcript_388268~~R_Transcript_388268.p1 ORF type:complete len:286 (+),score=32.20,RVT_3|PF13456.2|5.8e-15,zf-RVT|PF13966.2|1.7e-06,zf-RVT|PF13966.2|3.2e+03 R_Transcript_388268:113-970(+)
MNNLERRGVRVFNLCPFCLETEETEDHVFLYCQMVRRVWHACSLGIKLDANFELKVSDWVMDWFNLFWKQKNVSAIAIFLAVMWAIWIHRNAVVFNGESPDPRKIMELIQQCIQVLLTRDKIRNESMEGTEPINEKHLEFVHNKGSPQARRIFYIDGAWKKKSLTAGIGWVMYDETSSLLLGTGHCKTWARSALQTEYLALISAMEYALNGGFLDVQFLTDSKLLVSHLPNKDKVEYSIKSLHHKISNYILSFNSCHILHVPRSVVNEAHTIAVKARKGELPNVL*

Click here to download the sequence:
Link to NCBI Protein BLAST