Transcript Information: R_Transcript_388274.p1


Annotated TAIR IDAT5G23110.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7758307-7775509 | Forward length=4706
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.98444133892012
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_388274.p1 GENE.R_Transcript_388274~~R_Transcript_388274.p1 ORF type:5prime_partial len:159 (+),score=16.96,zf-C3HC4_3|PF13920.2|1e-10,Prok-RING_4|PF14447.2|1.5e-07 R_Transcript_388274:1-477(+)
AGCGGCTTCACCAAACGCATCGACGCCCTGGCCCAGAACGTCGCCGTCCCTCCTGCCCGTGTGGCTCCCAACGCCGCGGCCGAGGGATCTGGAAGTTCTGGAGCTCCCGCTGCTGCTGCTTCTTCTTCTGCTTCTTCTGGGGAGGGGGAGAAGTGGGACCTGCCGCGCCTGTTGTTTGCGGTGCAGAACGTCAACGAGCAGGAGAGCGCCGAGCTGGCCGAGGCTGCGGCTGAGTTCGTCGCCGCCGCCCGCCGCCGTGCCGAGGAGGAGGCCGCCCTGGAGGGACAGAAGGGGAAGTCCAAACTGGCCGAGTCCTCGGAGGACGAGTGCGGGCTCTGCCTGAACGGCAAGCCGGACACGGCCCTGATCGAGTGCGGCCATCTTGTGTGCAGCGCCTGCGCCCCTGGAGTGCTCGGCAAGGCCTGCCCTTTCTGCCGCCGTCCAGTTGTGCGCACCCTGCAGGTCTTCAAGCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_388274.p1 GENE.R_Transcript_388274~~R_Transcript_388274.p1 ORF type:5prime_partial len:159 (+),score=16.96,zf-C3HC4_3|PF13920.2|1e-10,Prok-RING_4|PF14447.2|1.5e-07 R_Transcript_388274:1-477(+)
SGFTKRIDALAQNVAVPPARVAPNAAAEGSGSSGAPAAAASSSASSGEGEKWDLPRLLFAVQNVNEQESAELAEAAAEFVAAARRRAEEEAALEGQKGKSKLAESSEDECGLCLNGKPDTALIECGHLVCSACAPGVLGKACPFCRRPVVRTLQVFKP*

Click here to download the sequence:
Link to NCBI Protein BLAST