Transcript Information: R_Transcript_388362.p4


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6661628360825
Replicate 22.1232213904122
Replicate 32.5737907411407
Condition 2: 8 Hour
Replicate 12.4760987025304
Replicate 21.2562293169205
Replicate 32.0395068112794
Condition 3: 24 Hour
Replicate 11.0318115607957
Replicate 20
Replicate 30.49185853228983


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_388362.p4 GENE.R_Transcript_388362~~R_Transcript_388362.p4 ORF type:complete len:89 (+),score=4.18,zf-RVT|PF13966.2|1e-10 R_Transcript_388362:3380-3646(+)
ATGCCTAAACACTCCATTATTTCTATGATGGATATTTCTAAGGCTTTACCTACCCATGACAACCTAACTAGGAGAGGTATCTGTATAGTTAGTAGATGTGTGCTCTGCTGTAATCAGAAAGAAGATGTATCCCACATCTTCTTTAAGCGTGCATATGCTGAGGCAGTATGGAGGGCGATCCTGGCGTGGATGAAAATATATAGAAGAGGTCTAAGCTTGGGAAGGAAGCTTAAATGGTACGCGAATCATGTAAAAGGGAAGAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_388362.p4 GENE.R_Transcript_388362~~R_Transcript_388362.p4 ORF type:complete len:89 (+),score=4.18,zf-RVT|PF13966.2|1e-10 R_Transcript_388362:3380-3646(+)
MPKHSIISMMDISKALPTHDNLTRRGICIVSRCVLCCNQKEDVSHIFFKRAYAEAVWRAILAWMKIYRRGLSLGRKLKWYANHVKGKS*

Click here to download the sequence:
Link to NCBI Protein BLAST