Transcript Information: R_Transcript_388375.p1


Annotated TAIR IDAT1G59760.1
Annotated Gene NameRNA helicase, ATP-dependent, SK12/DOB1 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21984571-21990110 | Reverse length=988
E-Value1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.055956418868
Replicate 20
Replicate 30.18931188095994
Condition 2: 8 Hour
Replicate 10
Replicate 21.293604734614
Replicate 31.5001331091229
Condition 3: 24 Hour
Replicate 10.75893577612245
Replicate 20
Replicate 31.2662308496552


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_388375.p1 GENE.R_Transcript_388375~~R_Transcript_388375.p1 ORF type:3prime_partial len:121 (+),score=25.90,DEAD|PF00270.25|4.5e-06 R_Transcript_388375:240-599(+)
ATGGGGTCACTAAAGAGAAAGGCAGAGGAACAACAGCAACAACAACAACAAGACCCAACAACAACAACAACAATGGAGACAAACCCACCTCCCCAAAAATTACTGAGAAAAGATGATACAACAACCGTTGCTTGTGTTCATGATGTTTCTTACCCTCAAGGTTACATCTTTACAAACCCTTCAACAACAACAACAACCCCAGCCAGGGAATTCCCCTTTACTCTTGACCCTTTTCAGGCTGAAGCTATCAAGTGCCTTGAAGCTGGTGAATCTGTCTTGGTGTCAGCCCACACATCAGCTGGAAAAACAGTCGTAGCATTATATGCTATTGCTATGTCACTACGTAACAAGCAAAGGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_388375.p1 GENE.R_Transcript_388375~~R_Transcript_388375.p1 ORF type:3prime_partial len:121 (+),score=25.90,DEAD|PF00270.25|4.5e-06 R_Transcript_388375:240-599(+)
MGSLKRKAEEQQQQQQQDPTTTTTMETNPPPQKLLRKDDTTTVACVHDVSYPQGYIFTNPSTTTTTPAREFPFTLDPFQAEAIKCLEAGESVLVSAHTSAGKTVVALYAIAMSLRNKQRV

Click here to download the sequence:
Link to NCBI Protein BLAST