Transcript Information: R_Transcript_38839.p1


Annotated TAIR IDAT1G69170.1
Annotated Gene NameSquamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26005626-26007041 | Forward length=405
E-Value3.5E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.899898572953
Replicate 27.7530508604351
Replicate 311.331954994563
Condition 2: 8 Hour
Replicate 111.853581264214
Replicate 214.459510165855
Replicate 317.093301167255
Condition 3: 24 Hour
Replicate 115.818983778807
Replicate 211.884900992272
Replicate 316.203088805318


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38839.p1 GENE.R_Transcript_38839~~R_Transcript_38839.p1 ORF type:complete len:566 (+),score=96.72,SBP|PF03110.10|7.4e-32 R_Transcript_38839:728-2425(+)
ATGGAATCCTGGTGCTTTGATTCTCTTGAAAAGGGTTATGTATCAAATGAAACAGTCTCTCCTTCTGATTCAATTACTGTTAGAACAAAAAATGTATTGATGGGATGGGAATTTAAGGCCCCTTTTAGTTATGAAAATAATTGTAGTACTATTACTACTAATATATTGGCCCCAAGTCAACAAACTATAGAAGAAAATCCTGGTTTTTCTGAGGAGGGTATTGCTGAAATGATGAGAAAACAATTCCCAAATGATTCAGTGAAGAATGTGCTCAATAATACTAATACTAATGATCCCAGTGGTGTTGGTGACATTATTTATCCTAGTATGGTTACTTCTAATGCTATTTCTGGGGATGATGAGTCAAGCTCGAAACTCTCGAGCTCAGTGGTGGATTCGAATAGCCGAGAATCATCACTCATTGATCTGAAATTGGGTAGATTTGGTGATAATAACACTAAGTCTAGTTCACCTAGAACAGCTCGCATTTTGTCTTCAGCAGAATCTTCAACACCAACTAAGAGAGCTCGAGCCGCTAGCTTGAGCCCTCAGACTGCTTATTGTCAAGTTTATGGCTGTAATAAAGATCTTAGCTCATCAAAGGATTACCACAAGAGGCACAAAGTTTGTGAAGTTCACTCAAAGACTGCTAAGGTTATTGTTAATGGCATTGAGCAGAGATTTTGTCAACAATGTAGCAGGTTTCATTTGCTGGGTGAATTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGACACAATGAACGAAGGAGAAAACCTCAAGTAGGCTTCAATAGTAGCAGAACTGGGAGATCACTTCATTCTTACACTGCTGGTTCCATAGGTAGCAAGTTTCAGGGGACGACTCCGACAGCGGCATCTTTTATTTGCCAAGATATACTAGGCTCTTCTGGTGCTGAGAAATACGGAGCAAATGTCTGGAGCCGACATATAAAGGAGGAGGATGGAGTAGACTGTGCTCAGAAGTTGGCAAATAATGGCATAAATGGCCAGATTACGCAAAAATCTATATTGTCCCCTTGTCTCTTTGAAAAGCAATACCCTCCTGTTATCGACAACTTGAATAACACTGGACCAGGAAGTGTTTTTGGTGAGAACGTCAATCAGTACCCCCATGAAATAGTCTCACGTTCCTTGTTCCAAGCAAACTCTCTAGGAAGTGAAGACGTGACGCTTTTTGATGCAGCATCAACCGTTCAAGGATTACCAGGGATATCAGAGTCCGGTTGTGCTCTCTCTCTTCTGTCATCTCAATCACAGAACTCACCTGGCCATTCATCAGGAATGCCTGTGGCTCAACATCCAGGTATATCAAGCAGCCCCCACTACAGCATGAGTGAAGTCTCCGAAAAGCTCTTTGGAGTTAGTTCACAGGGTTTAACAAATGGAGCTCAGAACAGTTATCCATCATATAGAATCAGTTCCACCGGGAGAAATCACCTGAACGCCATGCCAGGGCTGGTTAACGGTGATACTGTTAAATCTGACTTCAGAAATGGGATTCTCCAAGGTTCTGAATATATGAATGTCAAGGATCGTTTATCGTGTGAAGATGGCACTACCATTGATTTGCTTCAGTTGTCATCTCAGCTTCACCGAGTGGAAAACCAGAGGCAATCTGTGTCTGTGAAGCAAGAAAATGAAGGTTTTTGCCGTCTTAGAATGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38839.p1 GENE.R_Transcript_38839~~R_Transcript_38839.p1 ORF type:complete len:566 (+),score=96.72,SBP|PF03110.10|7.4e-32 R_Transcript_38839:728-2425(+)
MESWCFDSLEKGYVSNETVSPSDSITVRTKNVLMGWEFKAPFSYENNCSTITTNILAPSQQTIEENPGFSEEGIAEMMRKQFPNDSVKNVLNNTNTNDPSGVGDIIYPSMVTSNAISGDDESSSKLSSSVVDSNSRESSLIDLKLGRFGDNNTKSSSPRTARILSSAESSTPTKRARAASLSPQTAYCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLGEFDDGKRSCRKRLAGHNERRRKPQVGFNSSRTGRSLHSYTAGSIGSKFQGTTPTAASFICQDILGSSGAEKYGANVWSRHIKEEDGVDCAQKLANNGINGQITQKSILSPCLFEKQYPPVIDNLNNTGPGSVFGENVNQYPHEIVSRSLFQANSLGSEDVTLFDAASTVQGLPGISESGCALSLLSSQSQNSPGHSSGMPVAQHPGISSSPHYSMSEVSEKLFGVSSQGLTNGAQNSYPSYRISSTGRNHLNAMPGLVNGDTVKSDFRNGILQGSEYMNVKDRLSCEDGTTIDLLQLSSQLHRVENQRQSVSVKQENEGFCRLRMT*

Click here to download the sequence:
Link to NCBI Protein BLAST