Transcript Information: R_Transcript_388461.p1


Annotated TAIR IDAT4G15020.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:8575806-8578372 | Forward length=768
E-Value2E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72432384740947
Replicate 20.59989429760852
Replicate 30.54539851419411
Condition 2: 8 Hour
Replicate 10.73846259364708
Replicate 21.0293104339593
Replicate 30.69148992839569
Condition 3: 24 Hour
Replicate 10.25508674697449
Replicate 20.42010016934433
Replicate 30.31268149552711


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_388461.p1 GENE.R_Transcript_388461~~R_Transcript_388461.p1 ORF type:complete len:630 (+),score=118.89,DUF659|PF04937.11|7.9e-32 R_Transcript_388461:87-1976(+)
ATGACTATGGAATCTGATAAATGGGGGTGGAAACATGTGAGCGTTATAGGAGGATTTGATAAAGGAAGTGGTTCAAAGAGGTGGAAATGCAACCACTGTAATCATCATTACAATGGCTCCTATTCTAGGGTTCGAGCCCATCTTCTTGGTTTCCATGGCTTGGGTGTCAAATCTTGTCCTGCCATTGATGTTTCTTCAAGACAAGCTTTTAAGCTACTAGACGAGGATCGACTCGCTAGGAAGTTAGCCAAGAAGAAAGCTGGGAAATCTAATACTACTGCTAGAATGACTTCTCTTCAGACGAGTAATCATAAAATTTTGTCAAATAAGTTGAGAAAACTAGCTACAGAGGATGTAGATAACTCTGTGGCAAGATTCTTCTATGGAGATGGGTTGGATATTGATATTGTGAATTCATCTTTTTTTCGAGAAATGGTTCAAGCCATAGGAGCCTTTGGCCCCAGATATGAGCTTCCGTCAGTAGACCAGTTATCAGGTTGTTTGCTTAAGAAGGACAAACTGAGACTAGAGAAAGTCTTGGCTCTAGCTAGAGAGTCATGGCCTTACACAGGCTGCACTATACTCTGTGTCAACCGTCTTGATGGCGCACTTGGATGCTTCTGTGTTAACTTTTTCGTTGCAAGTCCAAGAGGGGTCATCTTCCTTAAGGAAGTCGACATCATTGAGGGTGATGGGCCTGACAATCAGTTCATCAATGAGCTCATCAATGGGATCACAGAGGTGGGTCCATCGAATGTGATCCAGGTAATAACCCATCTCGGTGGTCAGGCAAGTGATGCTTTTGAATCAGTCATAAGGTCTAAGTTCCCTCACATCTTTTGGTCTCATTGCACTTCACATTCTATCCTTCTGCTGCTGGAGGAGATTGCAGAAATTGATTGGATGAAATCTGTTGTTTCATATGCTAGAGAGATTGAGCAGTGTGTTTCAGCCTTTCAGACCTCTTCTTCCTGCACCAACATTGATCTGATCAAGGGTTTCTCGGGGCCTGTATCTCAGAAGTTTGCGCCTTCTTATTCCTTGGTGAAAAGGATTGTTGAAAGCAAAGCCAATTTATGCGAGGCAATGGCAACAGAAGATTGGAAACAATGGAGGCTTGATAATAATGTTTCTGAAAGTGGGCTCAATCATAGTAATATTGAAGCTGTTTTATCAAATGATGAATTTTGGGACAAGTCTCAATTGATGCTACAGGTCTATGAACCTTTTGTAAGCCTTCTAGACACATTGGATGTTGATAAAACTGTCATGGGCAACGTTTATAACTGGCGAATTCTGTCACTCGAAGCCTTGAGGAGTGAAAACATCAATCAATCAGTGTTGGGTCAGTTGGAATCACTAATTGAGAAGAGATGGGAGAAGTTATTTTCGCCTCTTCATGGGGCAGCTTATATATTGAATCCTAGATATCTTGGAAGAGGTCAAAGCAAGGATAAGTGTTTGATGAGGGCATGGAATGCAACCCTTGAGAGATACGAGCCTATTATGGAGAAACGTAGAGTGATTCGAGAAGAGCTAGGTGGGTACTGGATAGGAGAGGGGTCCTTTGGGGAAAGAGATGCAGTAGAATGTAGGGATAACATGGAGCCAGTTTCATGGTGGGAGAATTTCGGGTTTGAAACAGCACATCTTCAGAGTTTTGCCATTAAGATTTTGAGTCAAATTCCGAGTTCAGTGGTTGTTTGTCAAGAGAGCTGGCAATGTGATCAGCTGCCATGTAAAGAGGCTATTCAAAGGTATGGTTTGGGAGCAGAAAGTGCAAAAGATTTTGTGTTTGTGAGGAACAATCTGAGACTTCAGAGTCTTCGGAATAGGAAGTCTGGTTGTCGTTCTGGTACAGGGGAGGGGAATTTTTGTCTCAGGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_388461.p1 GENE.R_Transcript_388461~~R_Transcript_388461.p1 ORF type:complete len:630 (+),score=118.89,DUF659|PF04937.11|7.9e-32 R_Transcript_388461:87-1976(+)
MTMESDKWGWKHVSVIGGFDKGSGSKRWKCNHCNHHYNGSYSRVRAHLLGFHGLGVKSCPAIDVSSRQAFKLLDEDRLARKLAKKKAGKSNTTARMTSLQTSNHKILSNKLRKLATEDVDNSVARFFYGDGLDIDIVNSSFFREMVQAIGAFGPRYELPSVDQLSGCLLKKDKLRLEKVLALARESWPYTGCTILCVNRLDGALGCFCVNFFVASPRGVIFLKEVDIIEGDGPDNQFINELINGITEVGPSNVIQVITHLGGQASDAFESVIRSKFPHIFWSHCTSHSILLLLEEIAEIDWMKSVVSYAREIEQCVSAFQTSSSCTNIDLIKGFSGPVSQKFAPSYSLVKRIVESKANLCEAMATEDWKQWRLDNNVSESGLNHSNIEAVLSNDEFWDKSQLMLQVYEPFVSLLDTLDVDKTVMGNVYNWRILSLEALRSENINQSVLGQLESLIEKRWEKLFSPLHGAAYILNPRYLGRGQSKDKCLMRAWNATLERYEPIMEKRRVIREELGGYWIGEGSFGERDAVECRDNMEPVSWWENFGFETAHLQSFAIKILSQIPSSVVVCQESWQCDQLPCKEAIQRYGLGAESAKDFVFVRNNLRLQSLRNRKSGCRSGTGEGNFCLRV*

Click here to download the sequence:
Link to NCBI Protein BLAST