Transcript Information: R_Transcript_388492.p1


Annotated TAIR IDAT4G28080.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13948993-13957840 | Reverse length=1819
E-Value6.3E-188
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73600649010963
Replicate 20.056441667785748
Replicate 30.12315450320512
Condition 2: 8 Hour
Replicate 10.065822217600122
Replicate 20.060109897422542
Replicate 30.048794652205341
Condition 3: 24 Hour
Replicate 10.061714535558344
Replicate 20.059288330351014
Replicate 30.11767583164999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_388492.p1 GENE.R_Transcript_388492~~R_Transcript_388492.p1 ORF type:3prime_partial len:372 (+),score=64.15,CLU_N|PF15044.2|9.3e-21 R_Transcript_388492:53-1165(+)
ATGGCTCCAAAGGCTGGGAAGGCTAAGCAAAACAAGGCAAAAGGAGAGAAGAAGAAGAAGGAAGAGAAAGTTTTACCAATTGTAATTGAAGTAACAGTTGACACACCAGATGACTCTCGGATTACTATTAAGGGGATATCAACCGATAAGATTCTGGATGTGAGAAAGCTACTTGGAGTGCATGTTGAGACATGTCATTTGACCAATTATTCTCTTGCTCACGAGGTGCGGGGACCAAGGCTGAAGGATACGGTGGAGATCGTCTCTCTGAAACCCTCTCATCTCACCATCACTGAAGATGACTACACCGAAGACGACGCCGTACTGCACATCCGTAGGCTCCTGGACATTGTAGCGTGCACCACCGCGTTCGGGTCGAATCCGAACCAGAAGGCCGGTTCGGGTCGAAGAGAACCGGGCTCGGTCGAGAGTGGCGAACCGGAAAATGGGAAGAAAGAGAAAGAGGAGAAAGGAGAAGTGAACTTGTGCCCACCACCGAGGTTGGGGCAGTTTTATGACTTCTTCTCTTTCTCTCACCTGACTCCCCCTATTCATTATATTAGGAGATCTAACCGCCCCTTCCTCGAGGATAAAACAGAAGATGACTTTTTCCAAATTGATGTCCGGGTTTGCAGTGGAAAGCCTATGACAATTGTGGCTTCACGAGAAGGATTTTACCCCTCAGGAAGGAGACCACTTCTTTGTCACTCATTAGTAGGCCTGCTCCAACAGACAAGTCGTGTGTTTGAAGCGGCATACAAAGCCCTTCTGAAAGCATTTACAGAACACAACAAGTTTGGGAACCTCCCATATGGTTTTCGGTCAAACACTTGGGTTGTGCCCCCATTTGTCGCGGATAATCCATCTCTTTTCCCATCTCTTCCTGTGGAAGACGAAAACTGGGGTGGAAATGGTGGTGGTCAAGGAAGAGATGGAAGGCACGACCACAGGCAATGGGCCAAAGACTTCGCAATCTTGGCAGCCATGCCTTGCAAAACAGCGGAGGAGAGGCAAATACGAGACAGGAAGGCATTTCTCCTTCACAGTTTATTTGTCGACGTTTCAGTGTTTAAAGCTGTAGCTGCTGTTAAGCATATTACTCAAACCAATCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_388492.p1 GENE.R_Transcript_388492~~R_Transcript_388492.p1 ORF type:3prime_partial len:372 (+),score=64.15,CLU_N|PF15044.2|9.3e-21 R_Transcript_388492:53-1165(+)
MAPKAGKAKQNKAKGEKKKKEEKVLPIVIEVTVDTPDDSRITIKGISTDKILDVRKLLGVHVETCHLTNYSLAHEVRGPRLKDTVEIVSLKPSHLTITEDDYTEDDAVLHIRRLLDIVACTTAFGSNPNQKAGSGRREPGSVESGEPENGKKEKEEKGEVNLCPPPRLGQFYDFFSFSHLTPPIHYIRRSNRPFLEDKTEDDFFQIDVRVCSGKPMTIVASREGFYPSGRRPLLCHSLVGLLQQTSRVFEAAYKALLKAFTEHNKFGNLPYGFRSNTWVVPPFVADNPSLFPSLPVEDENWGGNGGGQGRDGRHDHRQWAKDFAILAAMPCKTAEERQIRDRKAFLLHSLFVDVSVFKAVAAVKHITQTNP

Click here to download the sequence:
Link to NCBI Protein BLAST