Transcript Information: R_Transcript_38870.p1


Annotated TAIR IDAT1G27300.1
Annotated Gene Nameunknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9483324-9484194 | Forward length=200
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1099382282148
Replicate 22.5028702483004
Replicate 32.4272039836983
Condition 2: 8 Hour
Replicate 13.7296350581897
Replicate 23.9983033755762
Replicate 33.4860709138491
Condition 3: 24 Hour
Replicate 14.8652306707717
Replicate 23.067287660279
Replicate 33.6237921667048


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38870.p1 GENE.R_Transcript_38870~~R_Transcript_38870.p1 ORF type:complete len:151 (+),score=37.80 R_Transcript_38870:217-669(+)
ATGAAGCCATCTGATCCTTCAGCTGAGATGAATGAGGTTGATGAAATGGACATAAAAAGCGAGGATGTAAATGCATCTTCTGCCAGCAACACAGGATCTGCAGGAGAAGATGTCGTTAAAGAATTGAAAAAATTGGAGAGGCAAAACAGGATCACCCATTTGTTACTTTCTGGCCTCATTGTTCTCACTGTTGTTTGGCAAGTCTCTGAGGTCTCCCTCTTGCTGAAAGTGAAAAACGGGTTGACTCACCCCTTCAAGTCTGTAGGAAGCATGGTGACAAGAGCTCTGAAACGCCCCAAAGAAGTGATACAAGATGCAGAGACACAACCATCTGCAAAGCAAAATGAGAATGAGAGCAATACTACATTTCCTAATATGGATATATCAGGCGTAATAATGAAAGGTTCAGTTCGTGTGGAATTTTCACATTGGATAAACTTTTTCTGGCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38870.p1 GENE.R_Transcript_38870~~R_Transcript_38870.p1 ORF type:complete len:151 (+),score=37.80 R_Transcript_38870:217-669(+)
MKPSDPSAEMNEVDEMDIKSEDVNASSASNTGSAGEDVVKELKKLERQNRITHLLLSGLIVLTVVWQVSEVSLLLKVKNGLTHPFKSVGSMVTRALKRPKEVIQDAETQPSAKQNENESNTTFPNMDISGVIMKGSVRVEFSHWINFFWL*

Click here to download the sequence:
Link to NCBI Protein BLAST