Transcript Information: R_Transcript_388763.p1


Annotated TAIR IDAT3G56030.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20791259-20792314 | Forward length=351
E-Value6.6E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1028979428833
Replicate 20.63432931771293
Replicate 31.0380696795839
Condition 2: 8 Hour
Replicate 11.1836067648215
Replicate 20.87822194542421
Replicate 30.93225794727063
Condition 3: 24 Hour
Replicate 10.69358934222671
Replicate 21.0661152333814
Replicate 31.8515278889218


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_388763.p1 GENE.R_Transcript_388763~~R_Transcript_388763.p1 ORF type:complete len:331 (+),score=51.70,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|6.6e-05,PPR_2|PF13041.2|5.9e-08,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|42,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|1.3,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.33,PPR|PF01535.16|0.00054,PPR|PF01535.16|4.4,PPR|PF01535.16|45,PPR|PF01535.16|1.1,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|2,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|17,PPR_1|PF12854.3|45,PPR_1|PF12854.3|3e+02,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|0.95,PPR_3|PF13812.2|19,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|3.1e+02 R_Transcript_388763:63-1055(+)
ATGCTAACCCTTCGTAAAATGCTCAAGCCCAGACACTCCACGATCCCATGGTCTCTACTTCACACCAGCACTCTGTGTCGAACCCATCCACAAGACCCAACCACCGAACCAACCACTGTCCACTACGACAACCTGGTGAACCAAGCAGGCCGATCTAAAGACCTCAAACGAGTCCAACACCTTCTCATTAAGCGCATCAATGATGGGTGCTTAAACAGCAAAGATACCTTCAACTTCATCACAACTACCCAAACCTCTCTTTCTTTGCTCGATGACCTGTTTGAATGTCTTGCTTCTCTCCCTAAAGGAATACCCAGAAAGAGCGCCTTTGATTCTTTTATCAATAGGTTGTCGAAACTGGGTCTTATCAAAGATGCACTCAAGGTGCTCGACAAAATGCGTGAGAGAGAGTTTGAGCTCAATGCTTGTTCTTTTCACCCGGTTATCAATGCACTTACTAGGAAGAAAGACATGGAGAGTGCCTTGAGGGTGTTGGAGGGAATCAAGGAGGTGGGAATCGAACCTGATACGACATCGTATAACTACCTCTTGACGGGGTATTGCCTTAAGGGCGAGGTGATTAGTGCATCTGATTTGCTGAGCAAGATGGTGGGAAAAGAAGGGTTGAAGGGTGATTCAAGGACGTACGATGCGATGGTGCTCGGGGCTTCTAGGGTGGGGAAGGTGGAGGGGGCCGTGGCGATGGTGCGAGCAGCGTTGGAGGATGGGGTGAGTTTGATGTACTGCACGTATGCGCATGTGATCAAAGCGTTGTTAGAGGAAGGGTATTATGACCAGGCTGTGAAGTTTGTTATGAGCTTTGCTGGGAGGGAGAGGGGTTTGGATAAAGAGAACTTTGAGTTGTTGGCTAATGGGTTTATTAAGTTAGAAAGGTTTGAGGATGCTAAGATGGTGGTTAATGAAATGAATATTAGGGGCTTGCCTTTGGGTAAGAAATTGATGGATTTTTACCATTTGCATGGATCAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_388763.p1 GENE.R_Transcript_388763~~R_Transcript_388763.p1 ORF type:complete len:331 (+),score=51.70,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|6.6e-05,PPR_2|PF13041.2|5.9e-08,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|42,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|1.3,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.33,PPR|PF01535.16|0.00054,PPR|PF01535.16|4.4,PPR|PF01535.16|45,PPR|PF01535.16|1.1,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|2,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|17,PPR_1|PF12854.3|45,PPR_1|PF12854.3|3e+02,PPR_3|PF13812.2|10,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|0.95,PPR_3|PF13812.2|19,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|3.1e+02 R_Transcript_388763:63-1055(+)
MLTLRKMLKPRHSTIPWSLLHTSTLCRTHPQDPTTEPTTVHYDNLVNQAGRSKDLKRVQHLLIKRINDGCLNSKDTFNFITTTQTSLSLLDDLFECLASLPKGIPRKSAFDSFINRLSKLGLIKDALKVLDKMREREFELNACSFHPVINALTRKKDMESALRVLEGIKEVGIEPDTTSYNYLLTGYCLKGEVISASDLLSKMVGKEGLKGDSRTYDAMVLGASRVGKVEGAVAMVRAALEDGVSLMYCTYAHVIKALLEEGYYDQAVKFVMSFAGRERGLDKENFELLANGFIKLERFEDAKMVVNEMNIRGLPLGKKLMDFYHLHGSG*

Click here to download the sequence:
Link to NCBI Protein BLAST