Transcript Information: R_Transcript_388934.p1


Annotated TAIR IDATMG00750.1
Annotated Gene NameGAG/POL/ENV polyprotein
Annotated Gene Symbol(s)ORF119
Annotation TypeOrtholog
Chromosome PositionchrM:220830-221189 | Forward length=119
E-Value1.8E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10168780476166
Replicate 20.11697103295988
Replicate 30.95710602769439
Condition 2: 8 Hour
Replicate 10.47744026359531
Replicate 20
Replicate 30.10112317894366
Condition 3: 24 Hour
Replicate 10.44764526627835
Replicate 20.12287052306728
Replicate 30.060968536732305


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_388934.p1 GENE.R_Transcript_388934~~R_Transcript_388934.p1 ORF type:internal len:359 (+),score=38.49 R_Transcript_388934:1-1074(+)
GCCAGGTTTTACCGGCGATTCGTTAAAGATTTTTCTAAAATAGCGAAACCTCTCACTAATTTACTTGTTAAAGATGTTCCTTTCATCTTTGATAATGATTGTCCCAATGCCTTTTGCAGGTTAAAGGAGGCTTTGATTTCTGCACCCATCATACAACCACCGGATTGGAGCTTGCCCTTCGAAGTTATGTGTGATGCGAGCGACTATGCTATTGGTGCGGTCCTAGGCCAAAGAAAGGATGGGAGAGTGCATGCGATCTATTATGCAAGTCGAACCCTTGATGATGCCCAAAGAAATTATGCAACAACGGAGAAAGAGCTCTTGGCCGTGGTCTTTGCCATGGATAAGTTTCGGTCTTACCTGATTAGCTCCAAAATCACCGTATTCACTGATCATGCGGCGATTAGGTATCTATTGAGTAAGAAAGATGCTAAACCAAGGTTGATAAGATGGATCCTACTCCTCCAAGAGTTCGACCTAGAGATCGAAGACAAGAAGGGCACTGAAAATGTAGTGGCAGACCATCTCTCCCGCTTAAGGCAAGAAATGGAAAAGGGTGAAGCTGATATCCTTCCCATCAATGAGTCATTCCCAGATGACCATCTTTTTTCCATTTCAAGTATAAAAGCCCCCTGGTACGCTGATTTTGTGAATTTTCTAGCTTGTGGAGTCTTACCACCAGACCTGACTTATCAACAAAAGAAGAAATTCTTTTCTGATGTCAAGTGCTACTATTGGGATGAGCCCCTTCTTTTTAAGAAATGTGTGGATGGTATATTGAGAAGATGTGCCCCGGAAGAAGAAGTCGAGAGTATTATTGCACATTGCCATTCATCTCCCTATGGAGGACATGCTAGCACCACAAAAACATACGAAAAAATCCTCAAAGCCGGTTTTTATTGGCCTACTTTGTTTAAGGATGTAAGAAACTTTGTTCTATCCTGCGATAAGTGTCAAAGAGTTGGCAATATATCAAGAAGACATGAGATGCCACTCAACAACATCCTCGAAGTAGAGGTATTTGATGTCTGGGGGATTGATTTCATGGGACCATTTCCACCCTCTTGTGGCAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_388934.p1 GENE.R_Transcript_388934~~R_Transcript_388934.p1 ORF type:internal len:359 (+),score=38.49 R_Transcript_388934:1-1074(+)
ARFYRRFVKDFSKIAKPLTNLLVKDVPFIFDNDCPNAFCRLKEALISAPIIQPPDWSLPFEVMCDASDYAIGAVLGQRKDGRVHAIYYASRTLDDAQRNYATTEKELLAVVFAMDKFRSYLISSKITVFTDHAAIRYLLSKKDAKPRLIRWILLLQEFDLEIEDKKGTENVVADHLSRLRQEMEKGEADILPINESFPDDHLFSISSIKAPWYADFVNFLACGVLPPDLTYQQKKKFFSDVKCYYWDEPLLFKKCVDGILRRCAPEEEVESIIAHCHSSPYGGHASTTKTYEKILKAGFYWPTLFKDVRNFVLSCDKCQRVGNISRRHEMPLNNILEVEVFDVWGIDFMGPFPPSCGN

Click here to download the sequence:
Link to NCBI Protein BLAST