Transcript Information: R_Transcript_38899.p1


Annotated TAIR IDAT2G32600.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13833779-13835525 | Reverse length=277
E-Value5.1E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.613195395068
Replicate 29.2501183652222
Replicate 322.586363643759
Condition 2: 8 Hour
Replicate 124.143405297633
Replicate 228.459304161509
Replicate 339.730448420847
Condition 3: 24 Hour
Replicate 143.989085177559
Replicate 227.144934019172
Replicate 349.897844251248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38899.p1 GENE.R_Transcript_38899~~R_Transcript_38899.p1 ORF type:complete len:143 (+),score=24.28,zf-met|PF12874.3|5.6e+03,zf-met|PF12874.3|6.3e-07 R_Transcript_38899:133-561(+)
ATGGATAGAGAGTGGGGATCGAAGCCAGGGAGTGGAGGAGCAGCGTCAGCCCAGAATGAAGCAATCGATCGTCGAGAGCGGCTGAGGCGTCTAGCCCTAGAGACCATCGATCTTGCCAAAGATCCTTATTTTATGCGAAACCATCTTGGGAGTTATGAATGTAAGTTGTGTTTGACATTGCACAACAATGAGGGCAACTACTTGGCTCATACTCAAGGCAAACGACATCAGACTAATTTGGCTAAACGAGCTGCTCGTGAAGCTAAGGATGCTCCTGCTCAGCCTCAGCCTAATAAGCGCAAAGTCAATCCTCGTAAAACTGTTAAAATTGGCAGACCTGGGTACCGAGTGACAAAGCAATTTGATCCTGAGACAAAGCAGAGATCTCTTCTTTTCCAGGGTTGCTCTGTTATTTGGATTTGCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38899.p1 GENE.R_Transcript_38899~~R_Transcript_38899.p1 ORF type:complete len:143 (+),score=24.28,zf-met|PF12874.3|5.6e+03,zf-met|PF12874.3|6.3e-07 R_Transcript_38899:133-561(+)
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKVNPRKTVKIGRPGYRVTKQFDPETKQRSLLFQGCSVIWICN*

Click here to download the sequence:
Link to NCBI Protein BLAST