Transcript Information: R_Transcript_389156.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54896123172086
Replicate 21.2629353633864
Replicate 30.68892443898203
Condition 2: 8 Hour
Replicate 10.73641699089459
Replicate 20.84063465568367
Replicate 31.09182620273
Condition 3: 24 Hour
Replicate 11.2083056435634
Replicate 21.9899481705784
Replicate 30.65827683268864


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_389156.p1 GENE.R_Transcript_389156~~R_Transcript_389156.p1 ORF type:complete len:133 (+),score=12.74,zf-RVT|PF13966.2|2.4e-10,zf-RVT|PF13966.2|4.3e+03 R_Transcript_389156:2033-2431(+)
ATGGCATTCCATGACAAACTTAAGACCGAAAGCTTGCTCAAGAGTAGGAAAATCATTGATACCAATCAATGCTCCTTATGCAATGGGGGCAGTGAATCAAGCTCCCATCTGTTCTTTCATTGCCCGGAAGTCAAGGAGGTCTGGCGAGTCATTTGTGATTGGGCCCAATCTGGAAGAAAGACACTTAGCTGGGCACATGAAGTTAGATGGTTACTAAGAAACAGAAGGAAGAAAAGCATGCTAAATCACCTACAGAGAGCTGTATTCATAACAGCAATTGCAGAAATATGGAGGGAAAGGAATATGTGTATGTTCCAGGGGAAGAAGAGACCTACATCTGTAATTACGAGAGAGATTCAGCTTATAGTGAGTATACTTTTGTACTGTAAATATGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_389156.p1 GENE.R_Transcript_389156~~R_Transcript_389156.p1 ORF type:complete len:133 (+),score=12.74,zf-RVT|PF13966.2|2.4e-10,zf-RVT|PF13966.2|4.3e+03 R_Transcript_389156:2033-2431(+)
MAFHDKLKTESLLKSRKIIDTNQCSLCNGGSESSSHLFFHCPEVKEVWRVICDWAQSGRKTLSWAHEVRWLLRNRRKKSMLNHLQRAVFITAIAEIWRERNMCMFQGKKRPTSVITREIQLIVSILLYCKYV*

Click here to download the sequence:
Link to NCBI Protein BLAST