Transcript Information: R_Transcript_389252.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46462082430193
Replicate 20
Replicate 30.16659445524475
Condition 2: 8 Hour
Replicate 10.089039508899073
Replicate 20.16262459520862
Replicate 30.19801757040422
Condition 3: 24 Hour
Replicate 10
Replicate 20.32080376568112
Replicate 30.2387749602207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_389252.p1 GENE.R_Transcript_389252~~R_Transcript_389252.p1 ORF type:3prime_partial len:275 (+),score=37.71,RVT_1|PF00078.23|3.1e-32 R_Transcript_389252:109-930(+)
ATGGAGGTAGTAATTTTTAAAATTGCTAGAAAAACAATAGCAAATAGGTTGAAGCTTATTTTGCCACATATAATTTCTGAGAACCAAAGTGCATTTACCCTGGGGAGAATGATTAGTGACAACATCATGGCTTCTTTTGAGATATTCCATTCTATGAATAATCAAATGGGGGCTAATGGGAGCATGGCTTTGAAATTAGATATGAGCAAAGCATATGATCGGGTAGAGTGGTGTTTTCTAGAGAGAATTATGTTGCAACTGGGGTTCTCATCTTGTTGGGTGAAAATGGTGATGAATTGTGTTAAAACTGTCTCGTACTCCTTTATGGTTAATGGAGAACCGAAAGGTTTCCTTAAACCTACTCAGGGTATTAGAAAAGGGGACCCGTTATCTCCTTATCTTTTCTTGTTTTGTGCGGAGGGTCTCTCGAGTATTATATCTCATGCTGTCATGAATGAGTCTTTCATTGGTCATACTATTTGTCAAGGTGCCCCTATGGTCTCTCACCTTCTATTTGCAGATGATACTATTATATTTGCCCAAGCCAATTTAGCTCATGCCACAAAAATTTTGGAATTGCTGCACTTATATGAGGAGTCTTCTGGTCAACAAATAAACAAGGCTAAAACTACTATATCTTATAGCAAGGGTGTCCCTCAAAGCAAAAGGAATGAGCTCACTACGGCCTTAGGCGTTCAACAGGTGCCACAGCAGAATGGATACTTGGGCCTTCCTACTCACATAGAGAGGTCAAGGAAAAAAGCTTTCCTTCCTATTAAAGACAAGGTCCAAAAGAAGCTTCAAGGGTGGATGGATAAATAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_389252.p1 GENE.R_Transcript_389252~~R_Transcript_389252.p1 ORF type:3prime_partial len:275 (+),score=37.71,RVT_1|PF00078.23|3.1e-32 R_Transcript_389252:109-930(+)
MEVVIFKIARKTIANRLKLILPHIISENQSAFTLGRMISDNIMASFEIFHSMNNQMGANGSMALKLDMSKAYDRVEWCFLERIMLQLGFSSCWVKMVMNCVKTVSYSFMVNGEPKGFLKPTQGIRKGDPLSPYLFLFCAEGLSSIISHAVMNESFIGHTICQGAPMVSHLLFADDTIIFAQANLAHATKILELLHLYEESSGQQINKAKTTISYSKGVPQSKRNELTTALGVQQVPQQNGYLGLPTHIERSRKKAFLPIKDKVQKKLQGWMDKY

Click here to download the sequence:
Link to NCBI Protein BLAST