Transcript Information: R_Transcript_389334.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value5.6E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4190671144808
Replicate 20.25296747489516
Replicate 30.68996197578772
Condition 2: 8 Hour
Replicate 12.2125781578836
Replicate 21.2123369672932
Replicate 32.624329246321
Condition 3: 24 Hour
Replicate 12.2128006966462
Replicate 20.66431502682462
Replicate 33.1644874246117


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_389334.p1 GENE.R_Transcript_389334~~R_Transcript_389334.p1 ORF type:3prime_partial len:166 (+),score=31.92 R_Transcript_389334:625-1119(+)
ATGAGTTTTGTTTTTCGTGGTAGCAGAGGAGATATTGAAAATGGGTTTACAGGAATTATTCCTGGACGACGCCCACTGCAGAGAATTCAGCATGTTCGACCTGTGAATACAAATTCATTGGCTTTTCTTGTCACTGTTCTTTTGCTGTTCACAATCTTGAATTCTCATCAGCTGTCACCTAACTTTTTGCTCTGGCTGGTTCTTGGTGTATTTCTGATCGCCACAAGCTTAAGGATGTATGCAACTTGTCAACAATTACAAGCACAAGCTCAAGCTCATGCTGCAGCTGCCAGTGGCTTATTCGGACATACAGAGTTGCACTTGCAGATGCCACCATCCATAGCTTTAGCGACCAGAGGGCGTCTACAGGGATTAAGGCTTCAGCTTGCACTTCTGGATCGTGAATTTGATGATCTAGATTATGAAACTTTAAGAGCGTTGGACTCTGACAATGGTCCCTCCACTCCTTCAATGAGCGAGGAAGAGATAAATGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_389334.p1 GENE.R_Transcript_389334~~R_Transcript_389334.p1 ORF type:3prime_partial len:166 (+),score=31.92 R_Transcript_389334:625-1119(+)
MSFVFRGSRGDIENGFTGIIPGRRPLQRIQHVRPVNTNSLAFLVTVLLLFTILNSHQLSPNFLLWLVLGVFLIATSLRMYATCQQLQAQAQAHAAAASGLFGHTELHLQMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNGPSTPSMSEEEINA

Click here to download the sequence:
Link to NCBI Protein BLAST