Transcript Information: R_Transcript_38952.p1


Annotated TAIR IDAT1G60080.1
Annotated Gene Name3'-5'-exoribonuclease family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22152605-22154339 | Reverse length=302
E-Value6.2E-143
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.77615027952
Replicate 225.126720170324
Replicate 327.788501346152
Condition 2: 8 Hour
Replicate 123.281642080987
Replicate 229.692318510427
Replicate 330.411386973829
Condition 3: 24 Hour
Replicate 125.742852694672
Replicate 227.623307856395
Replicate 329.638105035045


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38952.p1 GENE.R_Transcript_38952~~R_Transcript_38952.p1 ORF type:complete len:305 (+),score=78.02,RNase_PH|PF01138.17|1.2e-22 R_Transcript_38952:301-1215(+)
ATGGGTTCATCAGATGCTTCTGGAGATGTATCATCAGCTGATATGGAGGTTGATGCTTTCAGACGCTTATATCCTCTGCAATTCTATGAACGGCATTTTGTTAAATCCATAAGGCCTGATGCTAGGCCGCTTAAATGTTCCCGAGATACAACTGTCTCCTTTGGGGCAGTTGAATCCGCTAATGGTTCTGCACTTGTCAAAATTGGCAGCACAACGATGTTAGCTGCCATCAAGATGGAAATCATGACTCCTTCAGTGGAATCGCCAGATGAGGGCAACCTGGCTATTGAGTTCCACATGCCTCCTATTTGTTCCCCCCTTGTCAGGTCAGGCAGACCAGCAGAGGCTGCCTCAGTTATATCAAAGCAGCTATTGGACACCATTATTAGCGCTGGGATGATAAATTTGAAGGAGCTATGCTTGCTCAGTGGTAAAGCTGCTTGGATGGCATACCTGGATATATGCTGTTTGGATGCTGATGGTGCTCTCTTTGATGCAGCATTACTTGCAGCAGTTGCAGCTCTTTCTCATTTGCAAATTCCGGTTGTATCTTTGAACGAAGAAGGGAGAGTATTTATTGTGTCAGAGGAGGAAGAGGAAGCAAAGTCAAGGAAAGAGCTCGTTAATAAGGAAAAAAGAAAATTGACTTTAAGTAGCATTCCATTCTCGCTTACATGTGTTCTCCACAAGAATTATATATTAGCTGACCCTACTGCAGAGGAAGAGTCCATCATAGAAACTTCAGTAACTGTGGTGTTAAATTCTTGTGGTCAGCTTGTTTCACTTTACAAGCCTGGTGGACCTCTTATGGTGTACACAGCTGCCATCCAGGATTGTGTTGCATTAACAAGGCAGAGAGTAAAGGAACTCCAGCAGATCTTAGCTGAAGCCATTTCTGACATGGAGATAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38952.p1 GENE.R_Transcript_38952~~R_Transcript_38952.p1 ORF type:complete len:305 (+),score=78.02,RNase_PH|PF01138.17|1.2e-22 R_Transcript_38952:301-1215(+)
MGSSDASGDVSSADMEVDAFRRLYPLQFYERHFVKSIRPDARPLKCSRDTTVSFGAVESANGSALVKIGSTTMLAAIKMEIMTPSVESPDEGNLAIEFHMPPICSPLVRSGRPAEAASVISKQLLDTIISAGMINLKELCLLSGKAAWMAYLDICCLDADGALFDAALLAAVAALSHLQIPVVSLNEEGRVFIVSEEEEEAKSRKELVNKEKRKLTLSSIPFSLTCVLHKNYILADPTAEEESIIETSVTVVLNSCGQLVSLYKPGGPLMVYTAAIQDCVALTRQRVKELQQILAEAISDMEID*

Click here to download the sequence:
Link to NCBI Protein BLAST