Transcript Information: R_Transcript_389563.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value6E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2704142363662
Replicate 20.31105630246367
Replicate 30.16967953774928
Condition 2: 8 Hour
Replicate 10
Replicate 20.16563616178656
Replicate 30
Condition 3: 24 Hour
Replicate 10.17005783131633
Replicate 20
Replicate 30.16213114582887


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_389563.p1 GENE.R_Transcript_389563~~R_Transcript_389563.p1 ORF type:internal len:135 (+),score=7.48,PIF1|PF05970.10|3.1e-15 R_Transcript_389563:1-402(+)
TATAAGAGTTATGACACTACTGTCGACGATGATTGCAATGCTCATCCTGTTGAATTCCTCAACACTCTGTGCCCAGCAGGAATGAGCCCACACCTTCTAACACTGAAAGTCAATTGCCCGGTGATATTGCTTCGTAATCTCAACCCTTCTGTCGGCCTATGCAATGGAACAAGGCTCATCTGTCGAGACTTCAGAGCTAATCTTATTCTGTGTGAAATAGCAACAGGATATCGTGCTGGAGATTATGTATTTATTCCACGAATCAGTCTAAGGCCCTCATCTTCTGTCACTTATCCATACAGATTTGAGAGGAGACAATATCCGATCAAGTTGTGCTTTGCAATGACAATTAACAAATCACAAGGCCAGACACTGATTGACGTTGCCGTTTATCTACGACGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_389563.p1 GENE.R_Transcript_389563~~R_Transcript_389563.p1 ORF type:internal len:135 (+),score=7.48,PIF1|PF05970.10|3.1e-15 R_Transcript_389563:1-402(+)
YKSYDTTVDDDCNAHPVEFLNTLCPAGMSPHLLTLKVNCPVILLRNLNPSVGLCNGTRLICRDFRANLILCEIATGYRAGDYVFIPRISLRPSSSVTYPYRFERRQYPIKLCFAMTINKSQGQTLIDVAVYLRR

Click here to download the sequence:
Link to NCBI Protein BLAST