Transcript Information: R_Transcript_38959.p1


Annotated TAIR IDAT1G60080.1
Annotated Gene Name3'-5'-exoribonuclease family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22152605-22154339 | Reverse length=302
E-Value1.7E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9101532392811
Replicate 21.4734245906174
Replicate 31.0716602384165
Condition 2: 8 Hour
Replicate 11.8614985047613
Replicate 24.0537271174079
Replicate 35.6259377946229
Condition 3: 24 Hour
Replicate 14.8332225742535
Replicate 22.4505843211753
Replicate 33.711949917661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38959.p1 GENE.R_Transcript_38959~~R_Transcript_38959.p1 ORF type:complete len:171 (+),score=38.55,RNase_PH|PF01138.17|6.6e-13 R_Transcript_38959:329-841(+)
ATGGGTTCATCAGATGCTTCTGGAGATGTATCATCAGCTGATATGGAGGTTGATGCTTTCAGACGCTTATATCCTCTGCAATTCTATGAACGGCATTTTGTTAAATCCATAAGGCCTGATGCTAGGCCGCTTAAATGTTCCCGAGATACAACTGTCTCCTTTGGGGCAGTTGAATCCGCTAATGGTTCTGCACTTGTCAAAATTGGCAGCACAACGATGTTAGCTGCCATCAAGATGGAAATCATGACTCCTTCAGTGGAATCGCCAGATGAGGGCAACCTGGCTATTGAGTTCCACATGCCTCCTATTTGTTCCCCCCTTGTCAGGCCTGGCAGACCAGCAGAGGCTGCCTCAGTTATATCAAAGCAGCTATTGGACACTATTATTAGCACTGGGATGATAAATTTGAAGGGGCTATGCTTGCTCAGTGGTAAAGCTGCTTGGATGGCATACCTGCATTACTTGCAGCAGTTGCAGCTCTTTCTCATTTGCAAATTCCGGTTGTATCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38959.p1 GENE.R_Transcript_38959~~R_Transcript_38959.p1 ORF type:complete len:171 (+),score=38.55,RNase_PH|PF01138.17|6.6e-13 R_Transcript_38959:329-841(+)
MGSSDASGDVSSADMEVDAFRRLYPLQFYERHFVKSIRPDARPLKCSRDTTVSFGAVESANGSALVKIGSTTMLAAIKMEIMTPSVESPDEGNLAIEFHMPPICSPLVRPGRPAEAASVISKQLLDTIISTGMINLKGLCLLSGKAAWMAYLHYLQQLQLFLICKFRLYL*

Click here to download the sequence:
Link to NCBI Protein BLAST