Transcript Information: R_Transcript_38972.p1


Annotated TAIR IDAT1G24706.2
Annotated Gene NameTHO2
Annotated Gene Symbol(s)THO2
Annotation TypeOrtholog
Chromosome Positionchr1:8742210-8755250 | Forward length=1823
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.726461780763
Replicate 29.0950158002966
Replicate 311.38574289535
Condition 2: 8 Hour
Replicate 111.920922977537
Replicate 214.595186429888
Replicate 315.74503637281
Condition 3: 24 Hour
Replicate 116.143170943796
Replicate 211.495253023484
Replicate 314.051365971835


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38972.p1 GENE.R_Transcript_38972~~R_Transcript_38972.p1 ORF type:complete len:1863 (+),score=448.17,Tho2|PF11262.4|5.1e-98,Tho2|PF11262.4|1.6e+04,THOC2_N|PF16134.1|1.5e-52,THOC2_N|PF16134.1|2.3e-22,Thoc2|PF11732.4|2.4e-30 R_Transcript_38972:253-5841(+)
ATGTCCCAGTCTCTTCCTCCCATAGAGCGTGCCTATGTAACAGATGATTTTGTATCAGAATTGAAAAATGGCAACTCTACTTACAAATTGCCCCACCCTGTTCCTCTCCTTCGCTTCCTTTACGAGCTATGCTGGTCCATGGTTCATGGAACTCTGCCATTTCAGAAGTGTAAAGCCGCCTTGGATGCAGTCGAGTTTTCAGATTCAGTTTTGGAGGAGGAATTGGGTTCCAGTTTAGCAGATGTTGTCACTCAAATGGCTCTTGATCTGACCATGCCCATGGAATCCCGTGCTCGCCTAATTAAACTGGCAAGATGGCTTGTGGAGTCTTCACTAGTACCAGTGAGGTTCTTTCAAGAGCGCTGTGAGGAAGAATTTCTCTGGGAGTGTGAAATGGTCAAGATTAAGGCCCAAGATCTAAAATCGAAAGAGGTCAGGGTGAACACTCGTTTATTGTACCAACAGACAAAGTTTAACCTTCTTCGGGAAGAGAGCGAGGGCTATGCTAAATTGGTGACCCTACTCTGTGAGGGTTCTGGAGTTTCTAACTCTTCATCCTCAACAATTGGCACTATTAAGTCTTTAATTGGGCACTTTGACTTGGACCCCAATCGTGTTTTTGACATTGTTTTAGAGTGCTTTGAAATGCAGCCTAACAATGAGGCTTTTGTCGACTTAATTCCAATTTTCCCAAAGTCACATGCTTCACAAATCTTGGGCTTCAAATTTCAATACTACCAACGTATGGAAGTCCAAGACCCTGTTCCTTTTGGGTTGTATCAGCTTGCAGCTTTGCTTGTCAAACAAGATTTTGTGGATCTTGCTAGCATATATGCACATCTTCAGCCCAAGGATGAGGAAGCAATTGAGAATTCCAGTGCAATATATGCCAAGCGTCTTGATGAGGCCAACAAGATTGGAAAAATAAATCTTGCTGCAACTGGGAAGGACCTTATGGATGACGAGAAACAAGGAGATGTGACCATAGATCTCTATGCGGCTTTAGATATGGAACATCAAGCAGTCATTGAATCGTTTTCAGAACTGAAGAACAGCCAAACTTTGGGCTTGCTCACTGGTTTTCTTAATGTGGAGGACTGGTATCATGCGAATGTGCTTTTTCAGCGTCTCTCACCTCTTGTGCCAGTAGCTCATTCTCAGATTTGTTCTGGGTTGTTCAGGCTTATTGAAAAGTCAATATCTCCAGCATATGATATTGTTTGCAAAAATCGTTATGAACATTGTGGTATCATTTCCTCAAATGGTCATGAAGTTGTGGAGACTACCAATGCTTCAGGGAGTAGGTCACCAGTTTTGCTACCTAGAGATTTTTTTGAGATGCTTGTTTGTGTGGGACCTTATTTGTATCGTAATACTTTGTTGCTGCAGAAGGTTTGTAGAGTTCTAAGAGCTTACTATCTCTCGGCTCTTGAACTTGCACACAAGGAGGATGGAGCTTCCAGGCCTGTCACTGGAGTTAATGTTGTTCCTCGGCTAAAAGAAGCTAGGTTAAGGATTGAGGAAGCATTGGGATCATGTCTACTTCCTTCGTTACAATTAATACCTGCGAATCCTGCTGTTGGACAGGAGATTTGGGAAGTTATGAGTCTTCTTCCCTATGAGGTGAGATATCGTCTTTATGGTGAATGGGAAAAGGACGACGAGCAGATACCTATGATTTTGGCTGCGAGACAAACAGCTAAATTGGACACAAGAAGGATCCTGAAACGGCTTGCAAAAGAAAATTTGAAACAGCTGGGCCGCATGGTTGCTAAGCTTGCTCATGCGAATCCCTTGACTGTTCTCCGCACGATTGTTCACCAGATTGAAGCCTACCGTGATATGATTACTCCTGTTGTGGATGCTTTCAAGTACTTGACACAGCTGGAGTATGACATCTTGGAATATGTAGTGATTGAGCGATTGGCACAAAGTGGTCGTGAAAAACTTAAAGATGATGGGCTTAACTTATCAGATTGGCTTCAATCCCTGGCTTCTTTTTGGGGGCACCTGTGCAAGAAGTACCCTTCTATGGAGCTGAGGGGCCTCTTTCAGTATCTTGTTAATCAGTTGAAGAGGGGGCAAGGAATTGAACTTGTACTACTACAGGAACTAATGCAACAAATGGCAAATGTTCAGTACACTGAAAATATGACTGAAGACCAGTTGGACTCGATGGCTGGCGGTGAGACTCTGCGGTATCTTGCTACATCTTTTGGTGCTAGCCGAAATAATAAGGCATTAATTAAATCTACTAATAGACTGAGGGACTCTTTGCTCGCCAAGGACGAACCATCACTTGCAATTCCCCTTTTGCTCCTCATTGCACAACACCGTTCTGTGATTGTAATAAATGCAGATGCACCGTATATAAAGATGGTAAGTGAACTGTTTGACCGATGTCATGGAGTACTTCTTCAATATGTGGAATTCTTATGTAGCGCAATCAGTCCAGCAACTGCCTATGCACAATTGATACCAAACCTCCATGATCTTGTTCATTTGTACCACCTTGACCCTGAGGTGGCCTTTTTGATTTATCGTCCAGTTATGAGGCTTTTCAAGTGCCAAAGAAGGTCTACTTCCTGGCCCTTGTGTGATCATGAAAGCTCAATGGTAAAAGAAACTGAGCCAAATGGAGCTAGTGACCTGGTTTTGGATCTTAGTCCTCAGAATCCTCCTGTGAGGTGGTCTGATCTTCTTGATACAGTTCGAACTATGTTGCCTTCAAAAGCATGGAATAGCCTCTCTCCAGATTTGTATGCAACTTTTTGGGGTCTGACACTTTATGATCTTTATGTTCCTCGGAGTCGTTACGAGTCTGAAATTGCAAAGCAGTATGCTGCTTTAAAGGCTTTGGAAGAGCTCTCTGATAATTCAGGTTCTGCAATTGCTAAGAGGAAGAAAGACAAGGAGAGGATACAGGACTCCCTAGATCGTCTGACAAGTGAACTTCAAAAGCATGAGGAGAATGTTACATCTGTTCGTAAGAGGCTTGCTAGTGAAAAAGACAATTGGCTGAGTTCCTGTCCAGATACACTGAAGATCAACATGGAGTTTCTGCAGCGTTGCATTTTCCCTCGGTGTACATTCAGCATGCCTGATGCTGTTTACTGTGCAATGTTCGTCCATACTCTTCATTCCCTGGGAACACCCTTTTTTAACACAGTCAACCATATTGATGTTTTGATCTGTAAAACAATACACCCAATGATATGCTGCTGTACTGAATATGAAGCTGGTAGGCTTGGCAGATTTTTGTTTGAAACACTAAAAATTGCCTACTATTGGAAGAGTGATGAATCAGTGTATGAACGTGAATGTGGTAACATGCCTGGGTTTGCAGTCTATTATAGATATCCAAATAGTCAGCGAGTTACATATGGTCAGTTCATTAAGGTGCACTGGAAATGGAGTCAGAGAATTACCCGACTGTTGATACAGTGCCTGGAGTCTACAGAGTATATGGAAATTCGAAATGCTCTGATTATGCTAACGAAAATATCCAGTGTGTTTCCAGTTACTAGGAAAAGTGGGATTAACATTGAGAAACGAGTGGCAAAAATTAAAGGTGATGAAAGAGAAGACTTGAAGGTCTTGGCTACCAGTGTAGGGGCTGCTTTGGCTGCTAGAAAGCCTTCATGGGTGACAGAAGAAGAATTTGGGATGGGCTATCTTGAACTGAAGCCTGCACCATCAGCAGCTTCTAAGTCTGCCACAGGTAATGGTTCAGGCATTGGTGTGTCTCAAATTGAGTCCACTGGGGGAAAAGTGGCCTCTGAAGCACAAGTTACGGATTCTACAAATCCCCTGAAAGACCAAACATTTCGAACTAAGACCATTGATGGAAGATCAGAAAGGGCAGAAAGTTTCTCAGGAAATGTGAAGTTGAAAGGTGGTACAATCGCAAATGGGGCAGATATGCTGGTGACAGGTGCACACTCACATGCATTGTTAAAGTCATCAGAGAATCAGAAGCATGTAGATGAGCCTCCAAACAAGAGTATGGAAGAAAATGCTGCCAAAGTAATGGCAAAGGCATCTACTGAGAGTGAGGCAAAAGTTGCTGTAAAACGGGCGTCTTCTGGAGCTGGAACAAAGTCACTTAAACAAGAGCTTAAGGATGAGAATAAGTTAGCAAAAGCTTCTGGGAGAGGCAGTGGTGCATCTGTTGGTGAAAGAGATCAAATTGCATCAACTAATCTTTCTTCAGCTTCTGTTACTAATGGTTTTGCTGCTAACTCATCTAAAGCTTTAGCGTCATCCACACGAGCAGAAGTAGATGTTACTGAAGTGCGAGGAGATGGTGCATCCACAAAGTCTTCTGAGTTGAGGGGTTCTTCTGGGAGAGATGATGGTACTGATCTGTCTGATTTTCCGAAGCCTCTACATGGTCGTTCAGCTCAATCTTCTAGACATGATGCCGTTGCTAAATCCACTGAGAGACAACAGAAAAGATCTAGTCCTGCTGAAGAACCAGATAGGTTACATAAACGTAAGAAAGGTGATTCTGACACGAGAGATTTAGAAGTTGATATTCGATTGACTGATCGAGAACGGATTACTGAGCGTGCTATAGACAAATCTTATCCTGCAGATCTGGACAAGGCTGGGAGTGAGGAATTGACTACTGGTCGGGGTGCTGATAAACATTTGGAAAGGACAAAAGACAAAAGCTCTGATAAATTAGAGAGAGAGTACAGAGATCGATCAGATCGCATTGATAAACCTCGTACTGATGATATTTCATCTGAAAAGCTGAGAGACCGGTCAATGGAGCGATATGGAAGAGAACGTTCTGTTGAAAGAATTCCAGAGCGAAGGATTGATAGGAGTTTTGATGGGCCTGGTGAGAAAAACAGGGATGAAAGAACCAAGGATGAGCGAGCTAAGTTGCGTTACAGTGAAATATCTGGTGATAAATCTCATAATGATGAGCGCTTTCATTGTCAGAACTTGCCACCTCCACCTCCTTTACCTCCTCATGTTGTTCCGCAATCAGTAAGCGCTGGTCGAAGGGATGATGATGTTGACCGAAGATTTGCGACAGCAAGACATGCTCAAAGACTCTCTCCTAGACATGAAGAAAAAGAACGTAGACGTTCAGAGGAAAACTTGGTGGCTGCTCAGGATGATTTAAAACGAAGGAGAGAAGATGAATTTAGAGAAAGAAAGCGGGAAGAAAGGGATAGTATGGCAATGAAGGTGGAGGAAAGGGAGAAGGAGCGAGAGCGGGAGAGAGATCGAGCAAGCCTTTTGAAAGAGGATATGGATTCAACTGCTGCATCAAAAAGACGGAAGCTTAAGCGAGAACATATTCCTGGTGGAGAACCAGGTGAATACTCTCCTGTTGCTCCACTATCTTCTATTCCGATAGGCATGACACAATCATATGATGGTAGAGAAAGGGGAGACAGAAAAGGTTCAATGATTCAGCGTCAAGGTTACTTTGAGGAATCCAGTATGAGGATGCATGTAAAAGAGCCAGCAAGCAAAATGACACGACGTGATATTGATCCCATGTATGATCGTGAGTGGGATGATGAGAAGAGGCTAAGAGCTGAAGCAAAACGGCGACACAGGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38972.p1 GENE.R_Transcript_38972~~R_Transcript_38972.p1 ORF type:complete len:1863 (+),score=448.17,Tho2|PF11262.4|5.1e-98,Tho2|PF11262.4|1.6e+04,THOC2_N|PF16134.1|1.5e-52,THOC2_N|PF16134.1|2.3e-22,Thoc2|PF11732.4|2.4e-30 R_Transcript_38972:253-5841(+)
MSQSLPPIERAYVTDDFVSELKNGNSTYKLPHPVPLLRFLYELCWSMVHGTLPFQKCKAALDAVEFSDSVLEEELGSSLADVVTQMALDLTMPMESRARLIKLARWLVESSLVPVRFFQERCEEEFLWECEMVKIKAQDLKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCEGSGVSNSSSSTIGTIKSLIGHFDLDPNRVFDIVLECFEMQPNNEAFVDLIPIFPKSHASQILGFKFQYYQRMEVQDPVPFGLYQLAALLVKQDFVDLASIYAHLQPKDEEAIENSSAIYAKRLDEANKIGKINLAATGKDLMDDEKQGDVTIDLYAALDMEHQAVIESFSELKNSQTLGLLTGFLNVEDWYHANVLFQRLSPLVPVAHSQICSGLFRLIEKSISPAYDIVCKNRYEHCGIISSNGHEVVETTNASGSRSPVLLPRDFFEMLVCVGPYLYRNTLLLQKVCRVLRAYYLSALELAHKEDGASRPVTGVNVVPRLKEARLRIEEALGSCLLPSLQLIPANPAVGQEIWEVMSLLPYEVRYRLYGEWEKDDEQIPMILAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPLTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLAQSGREKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELMQQMANVQYTENMTEDQLDSMAGGETLRYLATSFGASRNNKALIKSTNRLRDSLLAKDEPSLAIPLLLLIAQHRSVIVINADAPYIKMVSELFDRCHGVLLQYVEFLCSAISPATAYAQLIPNLHDLVHLYHLDPEVAFLIYRPVMRLFKCQRRSTSWPLCDHESSMVKETEPNGASDLVLDLSPQNPPVRWSDLLDTVRTMLPSKAWNSLSPDLYATFWGLTLYDLYVPRSRYESEIAKQYAALKALEELSDNSGSAIAKRKKDKERIQDSLDRLTSELQKHEENVTSVRKRLASEKDNWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTIHPMICCCTEYEAGRLGRFLFETLKIAYYWKSDESVYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTKISSVFPVTRKSGINIEKRVAKIKGDEREDLKVLATSVGAALAARKPSWVTEEEFGMGYLELKPAPSAASKSATGNGSGIGVSQIESTGGKVASEAQVTDSTNPLKDQTFRTKTIDGRSERAESFSGNVKLKGGTIANGADMLVTGAHSHALLKSSENQKHVDEPPNKSMEENAAKVMAKASTESEAKVAVKRASSGAGTKSLKQELKDENKLAKASGRGSGASVGERDQIASTNLSSASVTNGFAANSSKALASSTRAEVDVTEVRGDGASTKSSELRGSSGRDDGTDLSDFPKPLHGRSAQSSRHDAVAKSTERQQKRSSPAEEPDRLHKRKKGDSDTRDLEVDIRLTDRERITERAIDKSYPADLDKAGSEELTTGRGADKHLERTKDKSSDKLEREYRDRSDRIDKPRTDDISSEKLRDRSMERYGRERSVERIPERRIDRSFDGPGEKNRDERTKDERAKLRYSEISGDKSHNDERFHCQNLPPPPPLPPHVVPQSVSAGRRDDDVDRRFATARHAQRLSPRHEEKERRRSEENLVAAQDDLKRRREDEFRERKREERDSMAMKVEEREKERERERDRASLLKEDMDSTAASKRRKLKREHIPGGEPGEYSPVAPLSSIPIGMTQSYDGRERGDRKGSMIQRQGYFEESSMRMHVKEPASKMTRRDIDPMYDREWDDEKRLRAEAKRRHRK*

Click here to download the sequence:
Link to NCBI Protein BLAST