Transcript Information: R_Transcript_389821.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value9E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39073616722639
Replicate 20.5136709581969
Replicate 30.35025592654667
Condition 2: 8 Hour
Replicate 10.52416224657711
Replicate 20.27352760662001
Replicate 30.055509512600572
Condition 3: 24 Hour
Replicate 10.21062208465784
Replicate 20.26978909957893
Replicate 30.26773950687336


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_389821.p1 GENE.R_Transcript_389821~~R_Transcript_389821.p1 ORF type:complete len:327 (+),score=37.50,RVT_3|PF13456.2|9.4e-21,zf-RVT|PF13966.2|6.5e-12,zf-RVT|PF13966.2|9e+02,RNase_H|PF00075.20|3.1e-06 R_Transcript_389821:3-983(+)
ATGAAATTCTTTCTTTGGCTGGTTTACCATGATCGCATTATGACCAACATGAATAGGTTCTTAAGAAACCTTACTGATGATGCTCGTTGCCATGTGTGTGGAACGCCCGAGGAAACGACGAGCCACCTTCTGCGTACCTACCCAGCTACTTCGAGTGTCTGGAGAAAGTTGGGAATGACAGGGGAGAGTTTATACTCGCGGCCTTTAAAGGAATGGATCTATGCCAAGCTACGAAAAGATACCAACCAGGATAGTGACATCATACTCTTTGGTGTCACCCTTTGGTGGCTTTGGAAGTGGAGAAACGAGAGGGTATTCAATGACACAACGAGAATACCACTGGACCAAGGAGGCTTTCTGCAGGAACGGGCAAAGGAGATTGAGGCTGCGCTGGGACTTGAACAACGTCTGATGCTGGCTATGGACCCACGAAGACAGGAGATTCTTATCAAGTGGCACACACCTAGAGATGGTTGGATAAAACTCAATACTGATGGGGCTTCGCGAGGTAATCCTGGCAGGGCAGGTGGCGGAGGAGTAATCTGTGATTCACTAGGAAGATTTATCCTTGGATACTCAGCCTCATATGGCAGATGCACAAGTGTTAAAGCTGAACTTTGGGCTATTCTTATGGGACTATCACATGTTTGGAATTTGGGGTATCGGAAGGCAGAGGTGGAAGTTGACTCAGAGGTTGTCATAAAGATGTTGAAAGGGCAAGCAACTCAAGCTACGACAAATTACCAGCTACTTGTCAAGTGCCAAATGATCATGAGAAGGGAAGCTTGGACTGTTGAGATTAAACATTGCTACAGAGAGGGCAACCAAGTAGCTGACAAGCTCGCAAATATTGGAGTGGAACAAATGGAGAAAATGTTGATCTATCAAACCCCCCCGGATGAAATACGTGAACTCCTCAAGAATGATGCACTGGAAGTTTCATGGCCTAGACTAGTGCCTCGTAGTATAGCTGGCAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_389821.p1 GENE.R_Transcript_389821~~R_Transcript_389821.p1 ORF type:complete len:327 (+),score=37.50,RVT_3|PF13456.2|9.4e-21,zf-RVT|PF13966.2|6.5e-12,zf-RVT|PF13966.2|9e+02,RNase_H|PF00075.20|3.1e-06 R_Transcript_389821:3-983(+)
MKFFLWLVYHDRIMTNMNRFLRNLTDDARCHVCGTPEETTSHLLRTYPATSSVWRKLGMTGESLYSRPLKEWIYAKLRKDTNQDSDIILFGVTLWWLWKWRNERVFNDTTRIPLDQGGFLQERAKEIEAALGLEQRLMLAMDPRRQEILIKWHTPRDGWIKLNTDGASRGNPGRAGGGGVICDSLGRFILGYSASYGRCTSVKAELWAILMGLSHVWNLGYRKAEVEVDSEVVIKMLKGQATQATTNYQLLVKCQMIMRREAWTVEIKHCYREGNQVADKLANIGVEQMEKMLIYQTPPDEIRELLKNDALEVSWPRLVPRSIAGS*

Click here to download the sequence:
Link to NCBI Protein BLAST