Transcript Information: R_Transcript_389977.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14839805654243
Replicate 20.34140325880159
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.37329767849925
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_389977.p1 GENE.R_Transcript_389977~~R_Transcript_389977.p1 ORF type:3prime_partial len:123 (+),score=8.95,RVT_1|PF00078.23|1.1e-07 R_Transcript_389977:189-554(+)
ATGATCGTGCGTCTTGGGATTTTTTGGATAGGGTATTGGCGGCTAAGGGGTTTGGGGAGCGTTGGCATAAGTGGCTTCGAGAGTGTTCTGGTAATGCTATCTTTTTCGGTATTGGTGAATGGAGCCCCTAGGGACTGGTTTTTCTCTTCTCGAGGTTTGCATCAAGGCGACCCCCTGTCTCCTTTTCTTTTTACCTTGGTGGTGGATGGCTTGAGTCGGATGCTAAAGAAAGAGGAAGTGGAGGATTTTAGGGTTAGACGCAAGGGGTTTTCTATTTCTCATCTACAGTGTCTGTTATGGTCTCTCGCTCGGGAGTCGGGCTGTCAGGTCCAGCAGTGGTCTCAAATACTTGGGGTAGGGGGTAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_389977.p1 GENE.R_Transcript_389977~~R_Transcript_389977.p1 ORF type:3prime_partial len:123 (+),score=8.95,RVT_1|PF00078.23|1.1e-07 R_Transcript_389977:189-554(+)
MIVRLGIFWIGYWRLRGLGSVGISGFESVLVMLSFSVLVNGAPRDWFFSSRGLHQGDPLSPFLFTLVVDGLSRMLKKEEVEDFRVRRKGFSISHLQCLLWSLARESGCQVQQWSQILGVGGN

Click here to download the sequence:
Link to NCBI Protein BLAST