Transcript Information: R_Transcript_390526.p1


Annotated TAIR IDAT5G15280.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4962293-4965976 | Forward length=1227
E-Value5E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30677245302048
Replicate 20.52931849788987
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.187906570094
Replicate 30.45760362908539
Condition 3: 24 Hour
Replicate 10.19292274981264
Replicate 20.18533831000485
Replicate 30.5517908744596


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_390526.p1 GENE.R_Transcript_390526~~R_Transcript_390526.p1 ORF type:5prime_partial len:119 (+),score=21.97,PPR_2|PF13041.2|0.0092,PPR_2|PF13041.2|0.55 R_Transcript_390526:3-359(+)
AAAAAAGGGTTTACAGATGAGAGCAAATTACTTCTTGATGAAATGTGTGGAAGGGAGATACCAATCACGAATGCAACATATACTGCAGTACTGTTGAGCTTCTGTAAGATTGAGAGGACTGGTGACTTTCTTGACTGCTGGGATATTGCACAAAGAGACAACTGGTTACCTGATTGGAAGAATTTTGCCACTATTTCGGGTTATTTATGTGAGAGAAAAATGGTCAAAGAATTGCTCGAGCTTTTCGACATCATGCTGATGTCTAACTCTGACTCTGCAATGCAAGTTTGCAACATACTTGCTCAAAAGATGTGTTCTGCTGGTTTTACAACCGTGGCACATATTTTGGTTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_390526.p1 GENE.R_Transcript_390526~~R_Transcript_390526.p1 ORF type:5prime_partial len:119 (+),score=21.97,PPR_2|PF13041.2|0.0092,PPR_2|PF13041.2|0.55 R_Transcript_390526:3-359(+)
KKGFTDESKLLLDEMCGREIPITNATYTAVLLSFCKIERTGDFLDCWDIAQRDNWLPDWKNFATISGYLCERKMVKELLELFDIMLMSNSDSAMQVCNILAQKMCSAGFTTVAHILVD*

Click here to download the sequence:
Link to NCBI Protein BLAST