Transcript Information: R_Transcript_390592.p2


Annotated TAIR IDAT5G42620.2
Annotated Gene Namemetalloendopeptidases;zinc ion binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17066630-17071766 | Forward length=889
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28972953896379
Replicate 20
Replicate 30.36359900946274
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1440604017491
Condition 3: 24 Hour
Replicate 10
Replicate 20.1750417372268
Replicate 30.86855970979751


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_390592.p2 GENE.R_Transcript_390592~~R_Transcript_390592.p2 ORF type:3prime_partial len:126 (+),score=19.60 R_Transcript_390592:540-914(+)
ATGGTGGATATTGCAATTCCAATACTGGTACTTGCACCTGTATTTATCCTTACTTTGGTCCACAATGCACATGGTTGCACTGTGGAACTGGTGGAACAGACTTGGAATGCAGTGGTCATGGTAAATGTAATTATGCGACCGGAAGTTGCTATTGTGATCCTGGATTTTCAGGATGTTTTTGCACTTCTTATGCTGGTTCAGGAACACCTCCTCCTGCTCGCTCACCTCCCACTCTTCCAACTTTCTTACAATGTGGAACTGGAGGCTCAGACCAAGTTTGCAGTGGTAATGGTGAATGTAACCACAGCACTGGTTCTTGCTATTGTGACCCCGGATGGCAAGGTTGCTACTGTAATCAATATTCAGGCAATTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_390592.p2 GENE.R_Transcript_390592~~R_Transcript_390592.p2 ORF type:3prime_partial len:126 (+),score=19.60 R_Transcript_390592:540-914(+)
MVDIAIPILVLAPVFILTLVHNAHGCTVELVEQTWNAVVMVNVIMRPEVAIVILDFQDVFALLMLVQEHLLLLAHLPLFQLSYNVELEAQTKFAVVMVNVTTALVLAIVTPDGKVATVINIQAIK

Click here to download the sequence:
Link to NCBI Protein BLAST