Transcript Information: R_Transcript_3909.p1


Annotated TAIR IDATCG01280.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.2
Annotation TypeOrtholog
Chromosome PositionchrC:145291-152175 | Reverse length=2294
E-Value9.8E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4989172735627
Replicate 20.49991191467376
Replicate 30.95444739983968
Condition 2: 8 Hour
Replicate 10.72874598057277
Replicate 21.1979043843492
Replicate 32.0528607249247
Condition 3: 24 Hour
Replicate 10.95657530115434
Replicate 20.26256260584021
Replicate 30.65141978234814


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3909.p1 GENE.R_Transcript_3909~~R_Transcript_3909.p1 ORF type:3prime_partial len:168 (+),score=3.56,DUF825|PF05695.8|7.1e-86 R_Transcript_3909:1406-1906(+)
ATGGTTCCTTACTTCGACAGGGTACAAATATCTAAATTGGATATTTTTAGATACTTTTCAGATCTATTGCCGATACTAAGTAGCAGTCAAAAATTTGTATCTATTTTTCATGATATTATGCATCGATCAGATATTTCATGGCAAATTCTTCAGCAAAAATTGTGTCTTCCTCAATGGAATTTGATAAGTGAGATTTCGAGTAAGTGTTTACATAATCTTCTTATGTCCGAAGAAATGATTCATCGAAATAATGAGTCACCGTTGATATGGACACATCTGGGATCGCCAAATGCTCGGGATTTCTTCTATTCAATCCTTTTCCTTCTTCTTGTTGTTGGATATCTCGTTCATACGCATCTTCTCTTTGTTTTTCGAGCCTATAGTGAGTTACAGACAGAGTTTGAAAAGGTCAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCTACATCGGAACCGAATTCCTTCTGGTTAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3909.p1 GENE.R_Transcript_3909~~R_Transcript_3909.p1 ORF type:3prime_partial len:168 (+),score=3.56,DUF825|PF05695.8|7.1e-86 R_Transcript_3909:1406-1906(+)
MVPYFDRVQISKLDIFRYFSDLLPILSSSQKFVSIFHDIMHRSDISWQILQQKLCLPQWNLISEISSKCLHNLLMSEEMIHRNNESPLIWTHLGSPNARDFFYSILFLLLVVGYLVHTHLLFVFRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEPNSFWLK

Click here to download the sequence:
Link to NCBI Protein BLAST