Transcript Information: R_Transcript_39103.p1


Annotated TAIR IDAT4G32060.1
Annotated Gene Namecalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15501134-15503321 | Forward length=498
E-Value4.4E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.777629934581
Replicate 220.959657658154
Replicate 326.024932242749
Condition 2: 8 Hour
Replicate 118.204150903188
Replicate 220.565767417635
Replicate 325.500953838414
Condition 3: 24 Hour
Replicate 122.917741246504
Replicate 222.401676569487
Replicate 324.523396874325


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39103.p1 GENE.R_Transcript_39103~~R_Transcript_39103.p1 ORF type:5prime_partial len:573 (+),score=116.99,EF-hand_8|PF13833.2|2e+03,EF-hand_8|PF13833.2|0.0041,EF-hand_8|PF13833.2|0.0065,EF-hand_8|PF13833.2|1.1e+03,EF-hand_8|PF13833.2|1.7e-12,EF-hand_1|PF00036.28|8.8e-05,EF-hand_1|PF00036.28|4.3e-07,EF-hand_1|PF00036.28|40,EF-hand_1|PF00036.28|5e+02,EF-hand_1|PF00036.28|5.1e+03,EF-hand_1|PF00036.28|0.0012,EF-hand_6|PF13405.2|0.0054,EF-hand_6|PF13405.2|5.3e-06,EF-hand_6|PF13405.2|68,EF-hand_6|PF13405.2|3e+03,EF-hand_6|PF13405.2|4.1e+02,EF-hand_6|PF13405.2|0.0019,EF-hand_7|PF13499.2|0.018,EF-hand_7|PF13499.2|0.0002,EF-hand_7|PF13499.2|0.01,EF-hand_5|PF13202.2|0.0037,EF-hand_5|PF13202.2|2.9e-05,EF-hand_5|PF13202.2|4.7e+03,EF-hand_5|PF13202.2|1.7e+02,EF-hand_5|PF13202.2|0.048 R_Transcript_39103:2-1720(+)
ACAGACTCACAGACTCACAGTTACGAAACTTCCCCAAATCCCCAATTCTGTGGTCTAATTCTTCTTTCTTCTTCAATCAGTCAACTTCTCAACAACACCATAAAAACTACACCTCCTTATCTCCCCCACTGCTCTTTGCTAAAACAAAATACCCAACCAAATTCCTCTAAAAAATCCATCAAAAAGCTTGTTCATTTCAATTCAATGGTTTCCTCAACACTTGTAAGAAGGACTACCTCAAAACCCTCCATTCATCATCTTCTGCCTTCCATCCAACGGCTCTCAGCTCGCCACCTGTCCTCATCCTCCAACAAAGACCCAAACTTTTCATCATCAACTTCTGCTTCTGAGTTCAGTAGTGGTGACAGATCATCATGGCTGTTGAGATTGGTTTCTGGGGTTGCTGTTGGGTCAAGCTTGGGGGCTTTGTATTATACCTCTTCATCATCTAATGATAATGATAATAAAGTTTGTTCATTTTCTGTTTTTGATTCATTAAAGGGCAAATCTTGTTTTGCTGACTGCTCATCTGCTCCTACAGAAGCTGTTACTACTACTACTTTGGATTCTGTCACTCATGCTCTCTCTTATAAGAAACCCAGGTTTCTCTTTCAAGATGCATACAGGAGGAAAATTTTCTTCAATTATGAAAAACGCATAAGGTTGCGAAGTCCTCCAGAGAAGGTATTTGAGTACTTTGCATCCACTCGAAATCTTGGAGGAGAAGTACTAATGACACCAGAAGATTTGATGCGCGCCGTTGTCCCTGTTTTTCCTCCATCTGAATCTCATCTAGTCCGAGATGGGTCTCTGCCTGGGGAGAGGCATCCGGGCGAGTTACGGTGTTCTCCTTCTGAGTTCTTTATGCTCTTTGATGTGAACAATGATGGGCTCATATCTTTTAAAGAGTATATATTCTTTGTTACCCTTCTCAGCATTCCGGAATCAAGCTTCTCTGTGGCATTTAAGATGTTTGATATTGATAACAATGGAGAGATTGACAGGGAGGAATTCAAAAAGGTGATGGCTCTGATGAGAGATCAAAACAGACAAGGAGCCACTCACCGAGATGGACTCCGAGCTGGAACTAAAATAGGAGGTGCAGTTGAAAATGGTGGCGTGGTTGAGTACTTCTTTGGTGAGGATGGTGAGAAACGCTTGCAACATAACAAATTTGTCGAATTCTTGAGGCGTCTACAAGAGGAAATATTGAGATTGGAGTTTGCCCATTATGATTATAAATCACAAGGGACTATATCAGCCAAGGATTTTGCTCTTTCCATGGTTGCTTCTGCTGACATAAAGCATATAAACAAGTTGCTTGATCGGGTTGAAGAATTAGACAGTGACTCATATCTTCGCAGCATACGGATCTCAGAAGATGAATTCCGCAAATTTGCGGAGCTGCGTAAGAAGTTGCAACCTTTTGCATTGGCATTGTTTGCTTACGGCAAAGCTAATGGTTTATTGACAAGGACTGACTTTCAAAGAGCTGCATCTCAGGTTTGTGGTGTTTCCCTCACGGACAATGTGGTCGATATCATTTACCATGTGTTCGATTCAAACCGTGATGGAAGTTTGACTGGTGACGAGTTTCTGAGAGTTATGGAGAAACGAGAGAGGGACATTGCTCAACCTGTAGAGACTGGCATGTTTGGCTTTCTATCATGCTGCTGGAATTGCACAAACAACCGCCCCCTCTCCCGGCTATTTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39103.p1 GENE.R_Transcript_39103~~R_Transcript_39103.p1 ORF type:5prime_partial len:573 (+),score=116.99,EF-hand_8|PF13833.2|2e+03,EF-hand_8|PF13833.2|0.0041,EF-hand_8|PF13833.2|0.0065,EF-hand_8|PF13833.2|1.1e+03,EF-hand_8|PF13833.2|1.7e-12,EF-hand_1|PF00036.28|8.8e-05,EF-hand_1|PF00036.28|4.3e-07,EF-hand_1|PF00036.28|40,EF-hand_1|PF00036.28|5e+02,EF-hand_1|PF00036.28|5.1e+03,EF-hand_1|PF00036.28|0.0012,EF-hand_6|PF13405.2|0.0054,EF-hand_6|PF13405.2|5.3e-06,EF-hand_6|PF13405.2|68,EF-hand_6|PF13405.2|3e+03,EF-hand_6|PF13405.2|4.1e+02,EF-hand_6|PF13405.2|0.0019,EF-hand_7|PF13499.2|0.018,EF-hand_7|PF13499.2|0.0002,EF-hand_7|PF13499.2|0.01,EF-hand_5|PF13202.2|0.0037,EF-hand_5|PF13202.2|2.9e-05,EF-hand_5|PF13202.2|4.7e+03,EF-hand_5|PF13202.2|1.7e+02,EF-hand_5|PF13202.2|0.048 R_Transcript_39103:2-1720(+)
TDSQTHSYETSPNPQFCGLILLSSSISQLLNNTIKTTPPYLPHCSLLKQNTQPNSSKKSIKKLVHFNSMVSSTLVRRTTSKPSIHHLLPSIQRLSARHLSSSSNKDPNFSSSTSASEFSSGDRSSWLLRLVSGVAVGSSLGALYYTSSSSNDNDNKVCSFSVFDSLKGKSCFADCSSAPTEAVTTTTLDSVTHALSYKKPRFLFQDAYRRKIFFNYEKRIRLRSPPEKVFEYFASTRNLGGEVLMTPEDLMRAVVPVFPPSESHLVRDGSLPGERHPGELRCSPSEFFMLFDVNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEIDREEFKKVMALMRDQNRQGATHRDGLRAGTKIGGAVENGGVVEYFFGEDGEKRLQHNKFVEFLRRLQEEILRLEFAHYDYKSQGTISAKDFALSMVASADIKHINKLLDRVEELDSDSYLRSIRISEDEFRKFAELRKKLQPFALALFAYGKANGLLTRTDFQRAASQVCGVSLTDNVVDIIYHVFDSNRDGSLTGDEFLRVMEKRERDIAQPVETGMFGFLSCCWNCTNNRPLSRLFS*

Click here to download the sequence:
Link to NCBI Protein BLAST