Transcript Information: R_Transcript_39113.p1


Annotated TAIR IDAT1G63800.1
Annotated Gene Nameubiquitin-conjugating enzyme 5
Annotated Gene Symbol(s)UBC5
Annotation TypeOrtholog
Chromosome Positionchr1:23667888-23669003 | Reverse length=185
E-Value4.3E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.80867548533564
Replicate 20.93021584122839
Replicate 30.72489675937191
Condition 2: 8 Hour
Replicate 10.30994765756007
Replicate 20.1415245686151
Replicate 30.91906889217149
Condition 3: 24 Hour
Replicate 10.58121030956213
Replicate 20
Replicate 30.96970843549545


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39113.p1 GENE.R_Transcript_39113~~R_Transcript_39113.p1 ORF type:complete len:158 (+),score=25.08,UQ_con|PF00179.22|2.6e+03,UQ_con|PF00179.22|2.4e-19 R_Transcript_39113:108-581(+)
ATGAAAAAAAATGGGCCATTATATATAAATATCCTCATTTCTTTCATGGATGTTCGAACGACTATTTTGCATTTCTCCCTTTGTGACCATAGCTCAGATTACCCCCCTCTCTCTCCCTTTCTCCCTCTCTCATTCTACATGACACTCGAACCCTTTTTTAAAGAAGAAGGGGAAATAAAAAAAAGAATTGGCCAACAAAAAAAAGGAAAAATGTCTTCCTCTAGCAAGCGCCGTGAGATGGACTTGATGAAACTGATGATGAGTGACTATAAAGTGAAGATGATCAATGATGGCATGCAAGAGTTTTATGTGGAATTTCATGGACCCAGTGACAGTCCTTATCAAGGAGGAGTGTGGAAGATAAGGGTGGAGCTGCCAGATGCATATCCATACAAGTCTCCTTCCATTGGTTTTATCAACAAGATATATCACCCTAATGTTGATGAAATGTCAAGACCTAGTAAATGTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39113.p1 GENE.R_Transcript_39113~~R_Transcript_39113.p1 ORF type:complete len:158 (+),score=25.08,UQ_con|PF00179.22|2.6e+03,UQ_con|PF00179.22|2.4e-19 R_Transcript_39113:108-581(+)
MKKNGPLYINILISFMDVRTTILHFSLCDHSSDYPPLSPFLPLSFYMTLEPFFKEEGEIKKRIGQQKKGKMSSSSKRREMDLMKLMMSDYKVKMINDGMQEFYVEFHGPSDSPYQGGVWKIRVELPDAYPYKSPSIGFINKIYHPNVDEMSRPSKCF*

Click here to download the sequence:
Link to NCBI Protein BLAST