Transcript Information: R_Transcript_39124.p1


Annotated TAIR IDAT2G06530.1
Annotated Gene NameSNF7 family protein
Annotated Gene Symbol(s)VPS2.1
Annotation TypeOrtholog
Chromosome Positionchr2:2588740-2590285 | Reverse length=225
E-Value8.8E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 182.790215758903
Replicate 288.578142381258
Replicate 395.717439241066
Condition 2: 8 Hour
Replicate 177.174199342657
Replicate 2106.31401411099
Replicate 3104.45279504321
Condition 3: 24 Hour
Replicate 173.587971381659
Replicate 264.09809615074
Replicate 372.209882873291


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39124.p1 GENE.R_Transcript_39124~~R_Transcript_39124.p1 ORF type:complete len:224 (+),score=70.68,Snf7|PF03357.17|1.5e-44,Snf7|PF03357.17|1.3e+03 R_Transcript_39124:344-1015(+)
ATGAGTTTTTTATTTGGAAAACGCAAAACCCCTGCAGAACTATTGCGGGAGAACAAGCGGATGTTAGATAAATCAATTAGAGAAATAGAAAGAGAAAGACAGGGTTTGCAAACTCAAGAGAAGAAGTTGATTGCTGAAATCAAGAAGAGCGCCAAGCAAGGCCAAATGGGAGCTGTCAGGATCATGGCAAAGGATCTTATTAGAACACGGCATCAGATTGAGAAATTCTACAAGCTCAAATCACAACTTCAAGGTGTTTCCTTAAGAATTCAGACACTGAAATCTACACAAGCCATGGGTCAAGCAATGAAAGGTGTCACGAAAGCCATGGGCCAAATGAACCGACAGATGAACCTTCCATCGTTGCAGAAAATAATGCAAGAGTTTGAGAGGCAGAATGAGAGGATGGAGCTTACAAGTGAAGTCATGGGAGATGCCATTGATGATGCTTTGGAGGGAGATGAAGAGGAGGAGGAAACAGACGAGCTTGTAAACCAGGTCCTCGATGAAATTGGTATTGACGTCAACCAAGAGCTTGTGAATGCGCCATCTGCTTCAGTTGCTGCACCTGCAGCGAAGAACAAGGTTGCGCAGGCTGAAGCCACAGGAGCCGATGATGGTGGGATTGACGATGATTTGCAGGCAAGGTTGGATAACCTGAGAAGAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39124.p1 GENE.R_Transcript_39124~~R_Transcript_39124.p1 ORF type:complete len:224 (+),score=70.68,Snf7|PF03357.17|1.5e-44,Snf7|PF03357.17|1.3e+03 R_Transcript_39124:344-1015(+)
MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRIMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGQAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNERMELTSEVMGDAIDDALEGDEEEEETDELVNQVLDEIGIDVNQELVNAPSASVAAPAAKNKVAQAEATGADDGGIDDDLQARLDNLRRM*

Click here to download the sequence:
Link to NCBI Protein BLAST