Transcript Information: R_Transcript_39126.p1


Annotated TAIR IDAT2G06530.1
Annotated Gene NameSNF7 family protein
Annotated Gene Symbol(s)VPS2.1
Annotation TypeOrtholog
Chromosome Positionchr2:2588740-2590285 | Reverse length=225
E-Value9.6E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.904104970469
Replicate 213.823651205762
Replicate 39.8171732554939
Condition 2: 8 Hour
Replicate 112.318975532465
Replicate 214.999846204025
Replicate 316.460466773767
Condition 3: 24 Hour
Replicate 110.694630696135
Replicate 29.5892429959032
Replicate 311.419672010555


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39126.p1 GENE.R_Transcript_39126~~R_Transcript_39126.p1 ORF type:5prime_partial len:161 (+),score=56.16,Snf7|PF03357.17|4.1e-27,Snf7|PF03357.17|7.6e+02 R_Transcript_39126:2-484(+)
AGGGAGCTTATTAGAACCCGGCAGCAGAATGAGAAATTGCACAAGCTCAAATCACAACTTCAATGTGCGCTCGTAAGACCTCAGACACTGACATCTACACAAGCCATGGGTGAAGCGATGAAAGGTGTCACGAAAGCTATGGGCCAAATGAATAGACAGATGAACCTTCCATCATTGCAGAAAATAATGCAAGAGTTTGAGAGGCAGAATGAGAGGATGGAGCTTACAAGTGAAGTCATGGGAGATGCCATTGATGATGCTTTGGAGGGAGATGAAGAGGAGGAGGAAACAGACGAGCTTGTAAACCAGGTCCTTGATGAAATTGGTATCGATGTTAACCAAGAGCTTGTGAATGCTCCATCTGCTTCAGTTGCTGCACCTGCAGCGAAGAACAAGGTTGCGCAGGCTGAAGCCACAGGAGCCGATGATGGTGGGATTGACGATGATTTGCAGGCAAGGTTGGATAACCTGAGAAGAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39126.p1 GENE.R_Transcript_39126~~R_Transcript_39126.p1 ORF type:5prime_partial len:161 (+),score=56.16,Snf7|PF03357.17|4.1e-27,Snf7|PF03357.17|7.6e+02 R_Transcript_39126:2-484(+)
RELIRTRQQNEKLHKLKSQLQCALVRPQTLTSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNERMELTSEVMGDAIDDALEGDEEEEETDELVNQVLDEIGIDVNQELVNAPSASVAAPAAKNKVAQAEATGADDGGIDDDLQARLDNLRRM*

Click here to download the sequence:
Link to NCBI Protein BLAST