Transcript Information: R_Transcript_391357.p1


Annotated TAIR IDAT5G58610.1
Annotated Gene NamePHD finger transcription factor, putative
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23686771-23691053 | Reverse length=1065
E-Value4E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1689088296125
Replicate 20.20686010262363
Replicate 30.56420535951114
Condition 2: 8 Hour
Replicate 10.96496019496533
Replicate 20.33045638188944
Replicate 30.7153344086852
Condition 3: 24 Hour
Replicate 10.79164852509325
Replicate 20.7605261686406
Replicate 30.64692723212504


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_391357.p1 GENE.R_Transcript_391357~~R_Transcript_391357.p1 ORF type:internal len:203 (+),score=31.96,Jas|PF16135.1|1e-19,Jas|PF16135.1|3.8e+03,PHD|PF00628.25|1.2e+03,PHD|PF00628.25|8.1e-08 R_Transcript_391357:3-608(+)
GGGCGGCAGTGCTCTAGAAGATTGAGTACCAGCTTCTTATCAAAGAAAAGAAAAGCCTTGAGTAGAGTAAGGCTCACCTCAGATGGTAACAAGTTGACTCAAGTGCTGCGTTCGAGTAAAAGAGTAAGGCAGGCAGGGCCTGTCTCTTCGTCTCAAGCTCCTCGGACAGTACTTTCATGGTTGATTGACAATGATGTGTCTTTGGCTAGGACAAAAATAATTTACCGTAGAGAAAGGGATGCGAAGGTAGTAGCTGAAGGACGAATAACTCGTGATGGAGTAAAGTGCAATTGCTGTGGAGAGGTGTTCTCTCTTAGCAGCTTTGGAGCTCATGCCGATAACAATTACCACCGACCAGCAGCAAATCTATTTTCTGAAGATGGGAGATCTCTGTTGGAATGCCAAATGCAAATGATGGATCAGACTTCCAGACACTCCTCCAGACAACTGGTTGATGGGGCTAGGGGAGATCATGAAAGCTGGAATGATCACGTTTGTTCGATTTGTCATTATGGTGGAAAATTAATTTTATGTGATAAGTGTCCATCCTCATTTCATGCAGACTGCCTCAATCTGCAGAAAAGTCCTGAAGGTGATTGGTTCTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_391357.p1 GENE.R_Transcript_391357~~R_Transcript_391357.p1 ORF type:internal len:203 (+),score=31.96,Jas|PF16135.1|1e-19,Jas|PF16135.1|3.8e+03,PHD|PF00628.25|1.2e+03,PHD|PF00628.25|8.1e-08 R_Transcript_391357:3-608(+)
GRQCSRRLSTSFLSKKRKALSRVRLTSDGNKLTQVLRSSKRVRQAGPVSSSQAPRTVLSWLIDNDVSLARTKIIYRRERDAKVVAEGRITRDGVKCNCCGEVFSLSSFGAHADNNYHRPAANLFSEDGRSLLECQMQMMDQTSRHSSRQLVDGARGDHESWNDHVCSICHYGGKLILCDKCPSSFHADCLNLQKSPEGDWFC

Click here to download the sequence:
Link to NCBI Protein BLAST