Transcript Information: R_Transcript_39169.p1


Annotated TAIR IDAT3G16950.2
Annotated Gene Namelipoamide dehydrogenase 1
Annotated Gene Symbol(s)LPD1, ptlpd1
Annotation TypeOrtholog
Chromosome Positionchr3:5786508-5790383 | Reverse length=623
E-Value1.8E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6105553783575
Replicate 20.7939777468348
Replicate 30.96246796622489
Condition 2: 8 Hour
Replicate 10.61729071295576
Replicate 20.93953285046998
Replicate 30.76267271514231
Condition 3: 24 Hour
Replicate 10.77169099925056
Replicate 21.3900373250364
Replicate 30.5517908744596


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39169.p1 GENE.R_Transcript_39169~~R_Transcript_39169.p1 ORF type:internal len:238 (+),score=40.15,Pyr_redox_2|PF07992.10|2.3e-22,Pyr_redox_2|PF07992.10|26,GIDA|PF01134.18|9.4e-11,FAD_oxidored|PF12831.3|7.4e-06 R_Transcript_39169:3-713(+)
CGAGTTCGCCTCCCGAGTTGCCGAGTTCAACCTCGAGTCACCGCCGCCTTGTCATCCACCAATGGCAGCGCTCCGACGTCGTTTGATTACGACCTCGTTATCATCGGTGCTGGTGTTGGAGGTCACGGTGCTGCTCTTCATGCCGTGGAGAAGGGCCTTAAAACTGCCATCATTGAAGGAGATGTGATGGGAGGAACTTGTGTGAACAGAGGTTGTGTACCTTCTAAAGCACTTCTGGCTGTCAGTGGGAGGATGCGTGAGCTTCAAAATGAACATCACTTGAAGTCTTTTGGACTACAGGTTGCTGCTGCTAATTATGATAGACAGGGTGTGGCTGACCATGCGAACAATCTTGCTTCAAAAATCCGCAACAATCTTACTAATTCACTGAAGGCACTTGGTGTGGATATATTAACAGGCTTTGGTACGATTCTGGGCCCACAAAAGATTCAGTTTGGGAAAGATAATGTTGTAACTGCAAAGGATATAATCATTGCAACTGGTTCTGTTCCTTTTGTCCCTAAAGGTTACATTTATAGAAGCTCTAGATCAACTCATACCCGGATTTACCCTGAGATTTCAAAGTTGGCCCAGAGAGTTCTGATTAATCCCAGGAAAATTGACTATCACACTGGAGTTTTTGCAACGAAGATCACTCCAGCAAAGGATGGCAAACCCGTCACTGACGAGCTCACGGATGCGAAGACAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39169.p1 GENE.R_Transcript_39169~~R_Transcript_39169.p1 ORF type:internal len:238 (+),score=40.15,Pyr_redox_2|PF07992.10|2.3e-22,Pyr_redox_2|PF07992.10|26,GIDA|PF01134.18|9.4e-11,FAD_oxidored|PF12831.3|7.4e-06 R_Transcript_39169:3-713(+)
RVRLPSCRVQPRVTAALSSTNGSAPTSFDYDLVIIGAGVGGHGAALHAVEKGLKTAIIEGDVMGGTCVNRGCVPSKALLAVSGRMRELQNEHHLKSFGLQVAAANYDRQGVADHANNLASKIRNNLTNSLKALGVDILTGFGTILGPQKIQFGKDNVVTAKDIIIATGSVPFVPKGYIYRSSRSTHTRIYPEISKLAQRVLINPRKIDYHTGVFATKITPAKDGKPVTDELTDAKTK

Click here to download the sequence:
Link to NCBI Protein BLAST