Transcript Information: R_Transcript_39201.p1


Annotated TAIR IDAT4G25240.1
Annotated Gene NameSKU5 similar 1
Annotated Gene Symbol(s)SKS1
Annotation TypeOrtholog
Chromosome Positionchr4:12930539-12933563 | Forward length=589
E-Value1.1E-300
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.040042520393
Replicate 214.448301642402
Replicate 320.227814046772
Condition 2: 8 Hour
Replicate 114.401008706261
Replicate 214.25032469879
Replicate 317.936252528281
Condition 3: 24 Hour
Replicate 129.417122481601
Replicate 223.924348627067
Replicate 335.168718717252


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39201.p1 GENE.R_Transcript_39201~~R_Transcript_39201.p1 ORF type:complete len:590 (+),score=94.75,Cu-oxidase|PF00394.18|3.5e-44,Cu-oxidase|PF00394.18|2.4e+02,Cu-oxidase_3|PF07732.11|4.7e-37,Cu-oxidase_3|PF07732.11|5.3,Cu-oxidase_3|PF07732.11|1.2e+04,Cu-oxidase_2|PF07731.10|1.3e+02,Cu-oxidase_2|PF07731.10|1.2e+03,Cu-oxidase_2|PF07731.10|1.2e-24 R_Transcript_39201:152-1921(+)
ATGGCGGTGAAGATGGTGTTCTTGGTTTATTTTGTGTTAGCTGGGTTTATTTTAAGGGGGTGTTTGGGTGCTGACCCTTACGCTAATTTCCAGTTCACTTACTCTTACAAAACCCTTTCCCCTCTTGGCGTTCCTCAACAGGTTATAGTGGTCAATGATAAATTTCCTGGTCCTCCAATTGAAGTCATCACTAATTACAATGTCGTTGTTGATGTGAAAAACAAACTAGATGAACACCTTCTGGTTAACTGGGCTGGAATTCATATGCAGCATGATTCTTGGCAAGATGGTGTACCAGGGACAAATTGTGCCATACCTCCCGGTTGGAATTTCACCTATCAGTTCCAGGCTAAGGATCAAATTGGAAGCTTCTTTTACCAGCCTTCAATCAATTTTCAAAGAGCTTCTGGTGGGTTTGGCCCCTTTATGATTGACAACAGGAGCATTATCCCCCTGCCTTTCAATAAGCCAGATGGGGATATCGTCCTTATGATTGGTGACTGGTATACTCGAGACCATAAGGCACTCAGGGCTGACTTGGATGCTGGGAAGGATTTGGGTATGCCGGATGGGGTTCTTATCAATGGAAAGGGACCTTACCAGTATAATAATACCCTTGTTCCAGATGGTATTGAGTATGAAACTATTAAGGTTGACCCAGGGAAAACATATCGTGTTCGAGTGCACAATATTGGAATCTCAACTAGTTTGAATTTTAGAATTCAAGGCCACAATCTGCTTCTGGTCGAAAGTGAAGGATTTTACACATCACAGGCAAACTTCAGTACCTTTGACATCCATGTTGGACAGTCGTATTCTTTTCTTGTTACGATGGATCAGAATGCTAGCACTGATTACTACATTGTAGCAAGTGCGAGGTTTGTAAATGAATCTGTTTGGCAAAGAGTCACTGGTGTCGCCATCTTGCAATATTCCAATTCCAAAGGAAAAGCAGCAGGCCCTCTTCCTGATCCTCCAAATGATCAATATGACAAGACTTGGTCATTGAACCAGGCAAGATCTGTCAGGCAAAATGGTTCCGCAAGTGGAGCCCGCCCAAACCCACAAGGTTCATTTCACTATGGCAGTATTAATGTGACTGATACGTACATCTTCCAGAGTTTGCCACCAACAACAATCAAGGGGAAACATCGTGCTACGCTAAATGGGATCTCATTTGTTGATCCTGCTACTCCGATTAGGCTTGCTGACTGGAAAAATGTCAAGGGTGACTACAAGCTGGATTTTCCAAGTAAGCCGCTTACAGGACGGCCACGGTTGGATACATCAGTCATAAACGGTACATTTAAAGGATTTGCTGAAATTGTATTTCAGAACAATGATACCGTGATGCAGACCTTTCACATGGACGGGTTTTCATTTTATGTTGTTGGAATGGATTACGGTATTTGGACAAATGATAGCCGGGGTAGCTACAACAAGTGGGATGCAGTTTCCCGCTGTACTGTACAGGTTTTCCCTGGGGGTTGGACAGCAGTCTATGTTTACCTAGACAATGAAGGTGCATGGAACATCAGAACGGAAAATCTCGATAGGTGGTATCTTGGCCAAGAAACCTATATTAGACTCATCAACCCAGAACTTAAGGCTACCGAATTTTCACCTCCTGACAATGTTATGTACTGTGGTGCTCTGGCTGGGTTGCAAAAGAAGCAAAACTATGCAACGTCAATGAAGGGGAACATAAGGTTGCTTGTCATTCTGCTGTTGGTTGCCCTCATTGCCCCTCCTGCTGCGCTAAGTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39201.p1 GENE.R_Transcript_39201~~R_Transcript_39201.p1 ORF type:complete len:590 (+),score=94.75,Cu-oxidase|PF00394.18|3.5e-44,Cu-oxidase|PF00394.18|2.4e+02,Cu-oxidase_3|PF07732.11|4.7e-37,Cu-oxidase_3|PF07732.11|5.3,Cu-oxidase_3|PF07732.11|1.2e+04,Cu-oxidase_2|PF07731.10|1.3e+02,Cu-oxidase_2|PF07731.10|1.2e+03,Cu-oxidase_2|PF07731.10|1.2e-24 R_Transcript_39201:152-1921(+)
MAVKMVFLVYFVLAGFILRGCLGADPYANFQFTYSYKTLSPLGVPQQVIVVNDKFPGPPIEVITNYNVVVDVKNKLDEHLLVNWAGIHMQHDSWQDGVPGTNCAIPPGWNFTYQFQAKDQIGSFFYQPSINFQRASGGFGPFMIDNRSIIPLPFNKPDGDIVLMIGDWYTRDHKALRADLDAGKDLGMPDGVLINGKGPYQYNNTLVPDGIEYETIKVDPGKTYRVRVHNIGISTSLNFRIQGHNLLLVESEGFYTSQANFSTFDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESVWQRVTGVAILQYSNSKGKAAGPLPDPPNDQYDKTWSLNQARSVRQNGSASGARPNPQGSFHYGSINVTDTYIFQSLPPTTIKGKHRATLNGISFVDPATPIRLADWKNVKGDYKLDFPSKPLTGRPRLDTSVINGTFKGFAEIVFQNNDTVMQTFHMDGFSFYVVGMDYGIWTNDSRGSYNKWDAVSRCTVQVFPGGWTAVYVYLDNEGAWNIRTENLDRWYLGQETYIRLINPELKATEFSPPDNVMYCGALAGLQKKQNYATSMKGNIRLLVILLLVALIAPPAALSF*

Click here to download the sequence:
Link to NCBI Protein BLAST